Merge pull request #24 from bjornwallner/mapping

DockQ v2.0

.github/workflows/main.yml

@@ -0,0 +1,32 @@
+name: CI
+
+on: [push, pull_request, workflow_dispatch]
+
+env:
+  MIN_COVERAGE_REQUIRED: 80
+
+
+jobs:
+  test:
+    if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.event.pull_request.base.repo.full_name
+    runs-on: ubuntu-latest
+    timeout-minutes: 10
+    defaults:
+      run:
+        shell: bash -l {0}
+
+    steps:
+      - uses: actions/checkout@v3
+      - name: Test outputs
+        run: |
+          python -m pip install .
+          python -m pip install coverage
+          bash run_test.sh
+      - name: Test with old biopython
+        run: |
+          python -m pip install biopython==1.79
+          bash run_test.sh
+      - name: Coverage
+        run: |
+          coverage report
+          test $(coverage report | grep TOTAL | awk '{ print $4 }' | tr -d "%") -ge $MIN_COVERAGE_REQUIRED