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lusSTR version 0.6
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@rnmitchell rnmitchell released this 21 Jul 15:03
· 31 commits to master since this release
0.6
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Learn about vigilant mode.
  • Small bugs within the conversion of FGA, D13 and D21 were fixed (#46, #47 and #48)
  • Filtering using various thresholds (detection, analytical, stutter and same size) can now be applied using either the CE allele (#49) or the bracketed sequence form (#51).
  • Create output files for STRmix (using CE allele or bracketed sequence form) and EuroForMix (CE allele only) (#49)
    • Can be formatted as either evidence or reference files
  • Workflows for STRs and SNPs are now organized using Snakemake (#52 and #53)
    • A config file is now required for running lusSTR (created using the command lusstr config)
    • All steps of the workflow can be run in a single command (lusstr strs all or lusstr snps all)
  • The SNP workflow can now process SNPs derived from the Kintelligence assay (#53)
  • The SNP workflow can now create evidence and reference files for input into EuroForMix (#53)
  • Minor changes to headers and code style (#50)
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