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Update pyprophet to 2.2.9 #53121

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Update pyprophet to 2.2.9 #53121

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03738dd
Update pyprophet to 2.2.9
BiocondaBot Jan 8, 2025
3ca6a07
Update meta.yaml
mencian Jan 13, 2025
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38 changes: 24 additions & 14 deletions recipes/pyprophet/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
{% set name = "pyprophet" %}
{% set version = "2.2.5" %}
{% set version = "2.2.9" %}
{% set hash_type = "sha256" %}
{% set hash_value = "f1d42ba53ecc0c0cac21e6938ad830f1260acb65ac69b3012a697f56e4badab3" %}
{% set hash_value = "47234bdb58ea80b27a065742d3f2ff967402ea8bcbb4a7ae4a2c3b71d7369ac5" %}

package:
name: '{{ name|lower }}'
Expand All @@ -12,38 +12,42 @@ source:
'{{ hash_type }}': '{{ hash_value }}'

build:
number: 4
number: 0
run_exports:
- {{ pin_subpackage(name, max_pin="x") }}
entry_points:
- pyprophet=pyprophet.main:cli
script: python -m pip install --no-deps --ignore-installed .
- pyprophet = pyprophet.main:cli
script: {{ PYTHON }} -m pip install --no-deps --no-build-isolation --no-cache-dir . -vvv

requirements:
build:
- {{ compiler('c') }}
host:
- python
- pip
- cython <1
- numpy >=1.9
- pypdf2
- cython
- numpy
- pypdf
- libgomp # [linux]
- llvm-openmp # [osx]
run:
- python
- libgomp # [linux]
- llvm-openmp # [osx]
- {{ pin_compatible("numpy") }}
- scipy
- python-duckdb
- pandas >=0.17
- numexpr >=2.1
- scikit-learn >=0.17
- matplotlib-base
- seaborn
- tabulate
- pyarrow
- xgboost
- hyperopt
- statsmodels >=0.8.0
- click
- dataclasses
- pypdf2
- pypdf
- typing-extensions

test:
Expand All @@ -54,12 +58,18 @@ test:

about:
home: https://github.com/PyProphet/pyprophet
license: BSD License
license: "BSD-3-Clause"
license_family: BSD
summary: Python reimplementation of mProphet peak scoring
license_file: LICENSE
summary: "PyProphet: Semi-supervised learning and scoring of OpenSWATH results."
dev_url: https://github.com/PyProphet/pyprophet
doc_url: https://openswath.org/en/latest

extra:
additional-platforms:
- linux-aarch64
identifiers:
- doi:10.1038/nmeth.1584
container:
# Click requires the extended container
extended-base: true
extended-base: True
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