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merge hackathon work #60

Merged
merged 10 commits into from
Sep 28, 2023
Merged

merge hackathon work #60

merged 10 commits into from
Sep 28, 2023

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jsstevenson
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theferrit32 and others added 10 commits September 17, 2023 10:43
* Update dev installation starting rest server
* Update db name anyvar_db --> anyvar
close #51

If memory serves, this was originally part of AnyVar, and I tore it out in favor of the VICC Variation Translator. This PR adds it back in as the default translator layer.

The only data dependency is a SeqRepo instance -- I think it makes sense to fall back on the VRS-Python create_dataproxy function and use the same URI schema that it prefers, but set it from the SEQREPO_DATAPROXY_URI variable and use REST service on localhost port 5000 by default (rather than erroring if it's unset)
@jsstevenson jsstevenson requested a review from a team as a code owner September 28, 2023 19:03
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Rebasing?

@jsstevenson jsstevenson merged commit ffd5dda into main Sep 28, 2023
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@jsstevenson jsstevenson deleted the hackathon-2023 branch September 28, 2023 19:58
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4 participants