Changes in version 0.1.0 (2023-03-16):
- Initial tagged release.
Changes in version 0.1.1 (2023-04-11):
- Split make.taxonomy.trees.R into two scripts: find.cutoffs.R and assign.node.tax.R
Changes in version 0.2.1 (2023-11-16)
- Added nearest neighbor code to improve the specificity of species assignments
- Began splitting up software pipeline from analysis in paper
- Added parrallel support to vastly improve software speed
- Added a number of fixes to the pipeline to improve speed (mostly using the Castor R package)
- Added parameters that can tweak over-grouping and over-splitting weights
- Added parameters to tweak the binomial error model
- Added support for multiple databases not just SILVA