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Remove RSPM from linux build test
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tkuntz-hsph authored Jun 5, 2023
1 parent de59004 commit 9899df4
Showing 1 changed file with 2 additions and 5 deletions.
7 changes: 2 additions & 5 deletions .github/workflows/main.yml
Original file line number Diff line number Diff line change
Expand Up @@ -40,14 +40,13 @@ jobs:
fail-fast: false
matrix:
config:
- { os: ubuntu-latest, cont: "bioconductor/bioconductor_docker", rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest" }
- { os: ubuntu-latest, cont: "bioconductor/bioconductor_docker" }
- { os: macOS-latest }
- { os: windows-latest }
## Check https://github.com/r-lib/actions/tree/master/examples
## for examples using the http-user-agent
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
NOT_CRAN: true
TZ: UTC

Expand Down Expand Up @@ -77,9 +76,7 @@ jobs:
- name: Install Linux system dependencies
if: runner.os == 'Linux'
run: |
sysreqs=$(Rscript -e 'cat("apt-get update -y && apt-get install -y", paste(gsub("apt-get install -y ", "", remotes::system_requirements("ubuntu", "20.04")), collapse = " "))')
echo $sysreqs
sudo -s eval "$sysreqs"
apt-get update -y && apt-get install -y make cmake libicu-dev zlib1g-dev pandoc
- name: Install macOS system dependencies
if: matrix.config.os == 'macOS-latest'
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