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  1. maxsonBraunLab/cutTag-pipeline maxsonBraunLab/cutTag-pipeline Public

    Pipeline for Cut&Tag analysis

    R 17 7

  2. maxsonBraunLab/CITEViz maxsonBraunLab/CITEViz Public

    CITEViz: Replicating the Interactive Flow Cytometry Workflow in CITE-Seq

    R 6 5

  3. Deduper-bioThai Deduper-bioThai Public

    Reference-based PCR duplicate removal tool. The deduplicator (deduper) Python script in this repository takes in SAM files of single-end RNA-seq reads and a text file of unique molecular identifier…

    Python

  4. Demultiplex Demultiplex Public

    Script to demultiplex 52 FASTQ files that contain biological reads with incorrect indexes or unmatched/low-quality-score indexes. This algorithm figures out which reads have hopped indexes and whic…

    Python

  5. world_database_gui_java world_database_gui_java Public

    A JavaFX GUI to retrieve and display data from a sample database. Implements event handlers and multi-threading to create/execute SQL queries and update visual control elements. Multi-threading is …

    Java

  6. gg_site gg_site Public

    JavaScript/HTML/CSS. Fictitious site containing JavaScript games. Uses JavaScript to implement mobile menu, cookies to set light/dark mode, closure functions, and more.

    HTML 1