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Releases: bids-standard/bids-validator

2.0.1

10 Dec 19:15
@effigies effigies
2.0.1
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Release notes

Bug-fix release in the 2.0.x series.

Added

  • --prune flag prunes sourcedata and derivatives directories before walking them. Time and memory savings can be significant, at the cost of underestimates of dataset size. (#124)

Fixed

  • Improve handling of .bidsignore files in the web validator. Ignores matching directories but not the files they contained could fail to match. (#113)

  • Resolve issue with parsing headers of NIfTI files with large extensions. Fixes issue 126.

Infrastructure

  • Adopting scriv for changelog management.

Merged pull requests

  • fix: Restore legacy/ subdirectory, redirecting to legacy-validator by @effigies in #108
  • rf(filetree): Uniformize bidsignore reading between web, CLI and test functions by @effigies in #113
  • test: Check that bidsignored files are accepted in scans.tsv by @effigies in #114
  • doc: Adopt scriv as a changelog manager by @effigies in #116
  • fix: Truncate NIfTI header data to avoid extensions by @effigies in #127
  • chore: Bump @bids/schema v1.0.0 by @effigies in #128
  • feat: Add --prune option to prevent walking subtrees by @effigies in #124
  • Fix bst call for compiling schema by @tstoeter in #119
  • Fill in URLs in the README.md by @yarikoptic in #120
  • doc: Conform README and docs/index by @effigies in #130

New Contributors

Full Changelog: 2.0.0...2.0.1

Contributors

yarikoptic, effigies, and tstoeter
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2.0.0

13 Nov 18:51
@effigies effigies
2.0.0
aaa53ce
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2.0.0

Release notes

This is the second major release of the BIDS Validator.

The validator has been rewritten from scratch to interpret the BIDS Schema. This new validator

A development version of the validator may be accessed at https://bids-standard.github.io/bids-validator/dev/. While we encourage testing of features in the upcoming release of BIDS, note that any feature may be reverted until BIDS is released. Use the stable validator to validate against the most recent release of BIDS.

This release includes an updated documentation site at https://bids-validator.readthedocs.io/en/latest/.

For more details on this release, see the announcement on the BIDS Blog.

Features

  • Validation of BIDS Derivatives (introduced in BIDS 1.4.0) datasets, including opt-in recursive validation of BIDS Derivatives datasets discovered in derivatives/ subdirectories.
  • Support for BIDS-MRS (Magnetic Resonance Spectroscopy), introduced in BIDS 1.10.0.
  • Consistent application of the inheritance principle
  • Consistent type-checking of JSON sidecar fields and TSV column entries
  • Consistent warning of missing RECOMMENDED metadata.
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