deploy: 1608530

bids-standard · Jun 27, 2024 · 14be7fc · 14be7fc
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diff --git a/CODE_OF_CONDUCT.html b/CODE_OF_CONDUCT.html
@@ -18,12 +18,12 @@
   </script>
 
   <!-- Loaded before other Sphinx assets -->
-  <link href="_static/styles/theme.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
-<link href="_static/styles/bootstrap.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
-<link href="_static/styles/pydata-sphinx-theme.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
+  <link href="_static/styles/theme.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
+<link href="_static/styles/bootstrap.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
+<link href="_static/styles/pydata-sphinx-theme.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
 
 
-  <link href="_static/vendor/fontawesome/6.5.2/css/all.min.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
+  <link href="_static/vendor/fontawesome/6.5.2/css/all.min.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
   <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-solid-900.woff2" />
 <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-brands-400.woff2" />
 <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-regular-400.woff2" />
@@ -38,9 +38,9 @@
     <link rel="stylesheet" type="text/css" href="_static/myfile.css?v=a4f16d0d" />
 
   <!-- Pre-loaded scripts that we'll load fully later -->
-  <link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=3ee479438cf8b5e0d341" />
-<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=3ee479438cf8b5e0d341" />
-  <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=3ee479438cf8b5e0d341"></script>
+  <link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=dfe6caa3a7d634c4db9b" />
+<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
+  <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
     <script src="_static/documentation_options.js?v=9eb32ce0"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
@@ -156,6 +156,8 @@
         <div class="sidebar-primary-item">
 
 
+
+
 
 <a class="navbar-brand logo" href="index.html">
 
@@ -177,7 +179,7 @@
 
  <script>
  document.write(`
-   <button class="btn navbar-btn search-button-field search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
+   <button class="btn search-button-field search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
     <i class="fa-solid fa-magnifying-glass"></i>
     <span class="search-button__default-text">Search</span>
     <span class="search-button__kbd-shortcut"><kbd class="kbd-shortcut__modifier">Ctrl</kbd>+<kbd class="kbd-shortcut__modifier">K</kbd></span>
@@ -402,18 +404,18 @@
 
 <script>
 document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
+  <button class="btn btn-sm nav-link pst-navbar-icon theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
+    <i class="theme-switch fa-solid fa-sun fa-lg" data-mode="light"></i>
+    <i class="theme-switch fa-solid fa-moon fa-lg" data-mode="dark"></i>
+    <i class="theme-switch fa-solid fa-circle-half-stroke fa-lg" data-mode="auto"></i>
   </button>
 `);
 </script>
 
 
 <script>
 document.write(`
-  <button class="btn btn-sm navbar-btn search-button search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
+  <button class="btn btn-sm pst-navbar-icon search-button search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
     <i class="fa-solid fa-magnifying-glass fa-lg"></i>
   </button>
 `);
@@ -663,8 +665,8 @@ <h2>Attribution<a class="headerlink" href="#attribution" title="Link to this hea
   </div>
 
   <!-- Scripts loaded after <body> so the DOM is not blocked -->
-  <script src="_static/scripts/bootstrap.js?digest=3ee479438cf8b5e0d341"></script>
-<script src="_static/scripts/pydata-sphinx-theme.js?digest=3ee479438cf8b5e0d341"></script>
+  <script src="_static/scripts/bootstrap.js?digest=dfe6caa3a7d634c4db9b"></script>
+<script src="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b"></script>
 
   <footer class="bd-footer">
   </footer>

diff --git a/CONTRIBUTING.html b/CONTRIBUTING.html
@@ -18,12 +18,12 @@
   </script>
 
   <!-- Loaded before other Sphinx assets -->
-  <link href="_static/styles/theme.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
-<link href="_static/styles/bootstrap.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
-<link href="_static/styles/pydata-sphinx-theme.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
+  <link href="_static/styles/theme.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
+<link href="_static/styles/bootstrap.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
+<link href="_static/styles/pydata-sphinx-theme.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
 
 
-  <link href="_static/vendor/fontawesome/6.5.2/css/all.min.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
+  <link href="_static/vendor/fontawesome/6.5.2/css/all.min.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
   <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-solid-900.woff2" />
 <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-brands-400.woff2" />
 <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-regular-400.woff2" />
@@ -38,9 +38,9 @@
     <link rel="stylesheet" type="text/css" href="_static/myfile.css?v=a4f16d0d" />
 
   <!-- Pre-loaded scripts that we'll load fully later -->
-  <link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=3ee479438cf8b5e0d341" />
-<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=3ee479438cf8b5e0d341" />
-  <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=3ee479438cf8b5e0d341"></script>
+  <link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=dfe6caa3a7d634c4db9b" />
+<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
+  <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
     <script src="_static/documentation_options.js?v=9eb32ce0"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
@@ -157,6 +157,8 @@
         <div class="sidebar-primary-item">
 
 
+
+
 
 <a class="navbar-brand logo" href="index.html">
 
@@ -178,7 +180,7 @@
 
  <script>
  document.write(`
-   <button class="btn navbar-btn search-button-field search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
+   <button class="btn search-button-field search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
     <i class="fa-solid fa-magnifying-glass"></i>
     <span class="search-button__default-text">Search</span>
     <span class="search-button__kbd-shortcut"><kbd class="kbd-shortcut__modifier">Ctrl</kbd>+<kbd class="kbd-shortcut__modifier">K</kbd></span>
@@ -403,18 +405,18 @@
 
 <script>
 document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
+  <button class="btn btn-sm nav-link pst-navbar-icon theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
+    <i class="theme-switch fa-solid fa-sun fa-lg" data-mode="light"></i>
+    <i class="theme-switch fa-solid fa-moon fa-lg" data-mode="dark"></i>
+    <i class="theme-switch fa-solid fa-circle-half-stroke fa-lg" data-mode="auto"></i>
   </button>
 `);
 </script>
 
 
 <script>
 document.write(`
-  <button class="btn btn-sm navbar-btn search-button search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
+  <button class="btn btn-sm pst-navbar-icon search-button search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
     <i class="fa-solid fa-magnifying-glass fa-lg"></i>
   </button>
 `);
@@ -894,8 +896,8 @@ <h2>Thank you<a class="headerlink" href="#thank-you" title="Link to this heading
   </div>
 
   <!-- Scripts loaded after <body> so the DOM is not blocked -->
-  <script src="_static/scripts/bootstrap.js?digest=3ee479438cf8b5e0d341"></script>
-<script src="_static/scripts/pydata-sphinx-theme.js?digest=3ee479438cf8b5e0d341"></script>
+  <script src="_static/scripts/bootstrap.js?digest=dfe6caa3a7d634c4db9b"></script>
+<script src="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b"></script>
 
   <footer class="bd-footer">
   </footer>

diff --git a/FAQ.html b/FAQ.html
@@ -18,12 +18,12 @@
   </script>
 
   <!-- Loaded before other Sphinx assets -->
-  <link href="_static/styles/theme.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
-<link href="_static/styles/bootstrap.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
-<link href="_static/styles/pydata-sphinx-theme.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
+  <link href="_static/styles/theme.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
+<link href="_static/styles/bootstrap.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
+<link href="_static/styles/pydata-sphinx-theme.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
 
 
-  <link href="_static/vendor/fontawesome/6.5.2/css/all.min.css?digest=3ee479438cf8b5e0d341" rel="stylesheet" />
+  <link href="_static/vendor/fontawesome/6.5.2/css/all.min.css?digest=dfe6caa3a7d634c4db9b" rel="stylesheet" />
   <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-solid-900.woff2" />
 <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-brands-400.woff2" />
 <link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.5.2/webfonts/fa-regular-400.woff2" />
@@ -38,9 +38,9 @@
     <link rel="stylesheet" type="text/css" href="_static/myfile.css?v=a4f16d0d" />
 
   <!-- Pre-loaded scripts that we'll load fully later -->
-  <link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=3ee479438cf8b5e0d341" />
-<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=3ee479438cf8b5e0d341" />
-  <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=3ee479438cf8b5e0d341"></script>
+  <link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=dfe6caa3a7d634c4db9b" />
+<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b" />
+  <script src="_static/vendor/fontawesome/6.5.2/js/all.min.js?digest=dfe6caa3a7d634c4db9b"></script>
 
     <script src="_static/documentation_options.js?v=9eb32ce0"></script>
     <script src="_static/doctools.js?v=9a2dae69"></script>
@@ -157,6 +157,8 @@
         <div class="sidebar-primary-item">
 
 
+
+
 
 <a class="navbar-brand logo" href="index.html">
 
@@ -178,7 +180,7 @@
 
  <script>
  document.write(`
-   <button class="btn navbar-btn search-button-field search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
+   <button class="btn search-button-field search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
     <i class="fa-solid fa-magnifying-glass"></i>
     <span class="search-button__default-text">Search</span>
     <span class="search-button__kbd-shortcut"><kbd class="kbd-shortcut__modifier">Ctrl</kbd>+<kbd class="kbd-shortcut__modifier">K</kbd></span>
@@ -403,18 +405,18 @@
 
 <script>
 document.write(`
-  <button class="btn btn-sm navbar-btn theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
-    <span class="theme-switch nav-link" data-mode="light"><i class="fa-solid fa-sun fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="dark"><i class="fa-solid fa-moon fa-lg"></i></span>
-    <span class="theme-switch nav-link" data-mode="auto"><i class="fa-solid fa-circle-half-stroke fa-lg"></i></span>
+  <button class="btn btn-sm nav-link pst-navbar-icon theme-switch-button" title="light/dark" aria-label="light/dark" data-bs-placement="bottom" data-bs-toggle="tooltip">
+    <i class="theme-switch fa-solid fa-sun fa-lg" data-mode="light"></i>
+    <i class="theme-switch fa-solid fa-moon fa-lg" data-mode="dark"></i>
+    <i class="theme-switch fa-solid fa-circle-half-stroke fa-lg" data-mode="auto"></i>
   </button>
 `);
 </script>
 
 
 <script>
 document.write(`
-  <button class="btn btn-sm navbar-btn search-button search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
+  <button class="btn btn-sm pst-navbar-icon search-button search-button__button" title="Search" aria-label="Search" data-bs-placement="bottom" data-bs-toggle="tooltip">
     <i class="fa-solid fa-magnifying-glass fa-lg"></i>
   </button>
 `);
@@ -987,8 +989,8 @@ <h2>Phenotype: Is there a standard for epilepsy phenotypes?<a class="headerlink"
   </div>
 
   <!-- Scripts loaded after <body> so the DOM is not blocked -->
-  <script src="_static/scripts/bootstrap.js?digest=3ee479438cf8b5e0d341"></script>
-<script src="_static/scripts/pydata-sphinx-theme.js?digest=3ee479438cf8b5e0d341"></script>
+  <script src="_static/scripts/bootstrap.js?digest=dfe6caa3a7d634c4db9b"></script>
+<script src="_static/scripts/pydata-sphinx-theme.js?digest=dfe6caa3a7d634c4db9b"></script>
 
   <footer class="bd-footer">
   </footer>

diff --git a/_sources/tutorials/pet.md b/_sources/tutorials/pet.md
@@ -19,13 +19,13 @@ and others use proprietary formats for example ECAT format (.v).
 In order to facilitate easy testing of data conversion across different PET file formats
 the [OpenNeuroPET project][OpenNeuroPET project] has compiled a bunch of phantom data
 from different scanner types and is distributing two examples
-[here](https://drive.google.com/file/d/10S0H7HAnMmxHNpZLlifR14ykIuiXcBAD/view?usp=sharing).
+[here](https://drive.google.com/file/d/1O1hDmJwR1xm6LemIbhPrLf9YkSYHC6Mq/view?usp=sharing).
 
 You can download them for testing purposes either manually
 or in the terminal by typing:
 
 ```{code-block} bash
-gdown https://drive.google.com/file/d/10S0H7HAnMmxHNpZLlifR14ykIuiXcBAD/view?usp=sharing --fuzzy
+gdown https://drive.google.com/file/d/1O1hDmJwR1xm6LemIbhPrLf9YkSYHC6Mq/view?usp=sharing --fuzzy
 ```
 
 You may need to install the python package [`gdown`](https://github.com/wkentaro/gdown)