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[FIX] update some internal links #2004

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4 changes: 2 additions & 2 deletions src/derivatives/imaging.md
Original file line number Diff line number Diff line change
Expand Up @@ -229,7 +229,7 @@ vertices) or a combined volume/surface space.

If the segmentation can be generated in different ways,
for example, following an atlas segmentation,
the [`seg` entity](../appendices/entities.md#segmentation) MAY be used to
the [`seg` entity](../appendices/entities.md#seg) MAY be used to
distinguish the name of the segmentation used.

The following section describes discrete and probabilistic segmentations of
Expand Down Expand Up @@ -293,7 +293,7 @@ In this case, the mask suffix MUST be used,
the [`label` entity](../appendices/entities.md#label) SHOULD be used
to specify the masked structure
(see [Common image-derived labels](#common-image-derived-labels)),
and the [`seg` entity](../appendices/entities.md#segmentation) SHOULD be defined.
and the [`seg` entity](../appendices/entities.md#seg) SHOULD be defined.

For example:

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2 changes: 1 addition & 1 deletion src/modality-specific-files/behavioral-experiments.md
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Expand Up @@ -44,7 +44,7 @@ and a guide for using macros can be found at

In addition to the metadata that is either:

- RECOMMENDED for sidecar JSON files for [tabular data](../common-principles.md#tabular-data), or
- RECOMMENDED for sidecar JSON files for [tabular data](../common-principles.md#tabular-files), or

- REQUIRED for some data that can be found in the `beh` directory
(for example `SamplingFrequency` and `StartTime` for `*_<physio|stim>.tsv.gz` files),
Expand Down
4 changes: 2 additions & 2 deletions src/modality-specific-files/electroencephalography.md
Original file line number Diff line number Diff line change
Expand Up @@ -272,7 +272,7 @@ Examples of free-form text for field `description`

### Example `*_channels.tsv`

See also the corresponding [`electrodes.tsv` example](#example-electrodestsv).
See also the corresponding [`electrodes.tsv` example](#example-_electrodestsv).

```Text
name type units description reference status status_description
Expand Down Expand Up @@ -316,7 +316,7 @@ If electrodes are repositioned, it is RECOMMENDED to use multiple sessions to in

### Example `*_electrodes.tsv`

See also the corresponding [`electrodes.tsv` example](#example-channelstsv).
See also the corresponding [`channels.tsv` example](#example-_channelstsv).

```Text
name x y z type material
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Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@ MRI acquisition parameters are divided into several categories based on
When adding additional metadata please use the CamelCase version of
[DICOM ontology terms](https://dicom.nema.org/medical/dicom/current/output/chtml/part16/chapter_d.html)
whenever possible. See also
[recommendations on JSON files](../common-principles.md#keyvalue-files-dictionaries).
[recommendations on JSON files](../common-principles.md#key-value-files-dictionaries).

### Hardware information

Expand Down Expand Up @@ -1354,6 +1354,6 @@ See [Using `IntendedFor` metadata](#using-intendedfor-metadata)
for details on the `IntendedFor` field.

As for other EPI sequences, these field mapping sequences may have any of the
[in-plane spatial encoding](#in-plane-spatial-encoding) metadata keys.
[in-plane spatial encoding](#in-and-out-plane-spatial-encoding) metadata keys.
However, please note that `PhaseEncodingDirection` and `TotalReadoutTime` keys
are REQUIRED for these field mapping sequences.
2 changes: 1 addition & 1 deletion src/modality-specific-files/magnetoencephalography.md
Original file line number Diff line number Diff line change
Expand Up @@ -187,7 +187,7 @@ A guide for using macros can be found at

#### Specific EEG fields

If recorded with MEG, see [Recording EEG simultaneously with MEG](#recording-eeg-simultaneously-with-meg)
If recorded with MEG, see [Recording EEG simultaneously with MEG](#recording-ieeg-simultaneously-with-meg)
SHOULD be present:

<!-- This block generates a metadata table.
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2 changes: 1 addition & 1 deletion src/schema/objects/entities.yaml
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Expand Up @@ -275,7 +275,7 @@ run:
(only nonnegative integers are allowed as run indices).

If different entities apply,
such as a different session indicated by [`ses-<label>`][SPEC_ROOT/appendices/entities.md#ses),
such as a different session indicated by [`ses-<label>`](SPEC_ROOT/appendices/entities.md#ses),
or different acquisition parameters indicated by
[`acq-<label>`](SPEC_ROOT/appendices/entities.md#acq),
then `run` is not needed to distinguish the scans and MAY be omitted.
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4 changes: 2 additions & 2 deletions src/schema/rules/json/meg.yaml
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Expand Up @@ -20,15 +20,15 @@ MEGCoordsystemWithEEG:
level: optional
description_addendum: |
See [Recording EEG simultaneously with MEG]
(/modality-specific-files/magnetoencephalography.html#recording-eeg-simultaneously-with-meg).
(/modality-specific-files/magnetoencephalography.html#recording-ieeg-simultaneously-with-meg).
Preferably the same as the `MEGCoordinateSystem`.
EEGCoordinateUnits: optional
EEGCoordinateSystemDescription:
level: optional
level_addendum: required if `EEGCoordinateSystem` is `Other`
description_addendum: |
See [Recording EEG simultaneously with MEG]
(/modality-specific-files/magnetoencephalography.html#recording-eeg-simultaneously-with-meg).
(/modality-specific-files/magnetoencephalography.html#recording-ieeg-simultaneously-with-meg).

MEGCoordsystemWithEEGMEGCoordinateSystem:
selectors:
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