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Alternative proposal to BEP038#1856

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oesteban wants to merge 48 commits intobids-standard:bep038bids-standard/bids-specification:bep038from oesteban:bep038-reviewoesteban/bids-specification:bep038-reviewCopy head branch name to clipboard

+2,195-813

Commits

Commits on Jun 12, 2024

• first iteration of the alternative proposal

  oesteban

  committed
  4fa15e5

• STY: codespell

  effigies

  committed
  0180e3b

• Replace links to the schema with links to the glossary

  effigies

  committed
  bba4159

Commits on Jun 17, 2024

• enh: generalization of atlas metadata cc/ @jdkent

  oesteban

  committed
  f159e61

• enh: address some of @effigies' comments

  oesteban

  committed
  9390602

• enh: reference entities from glossary

  oesteban

  committed
  3f8c210

• fix: folder => directory

  oesteban

  committed
  927335c

• fix: resolving issues with/within entities

  oesteban

  committed
  6a3dcc7

• enh: add mention to transforms files cc/ @PeerHerholz

  oesteban

  committed
  f7e906d

• fix: revise more glossary links

  oesteban

  committed
  57160cd

• enh: move all filetree examples to macros

  oesteban

  committed
  1db3fd4

• enh: miscellaneous improvements (sort entries in examples, etc.)

  oesteban

  committed
  48e77ae

Commits on Jun 18, 2024

• enh: improve intro

  oesteban

  committed
  d6cf6a4

• enh: add datatype comment to make it recommended cc/ @effigies

  oesteban

  committed
  8bfc7ac

• enh: start drafting cohort

  oesteban

  committed
  f2be20a

• enh: add multi-cohort example

  oesteban

  committed
  d15677a

• fix: pacify pre-commit build

  oesteban

  committed
  b275ca3

• enh: add the PS13 example

  oesteban

  committed
  f9ff346

Commits on Jun 21, 2024

• test

  jdkent

  committed
  f0e8e0e

• Update src/derivatives/atlas.md

  Show description for b00bdf8
  

  jdkent

  and

  effigies

  authored
  b00bdf8

• Update src/derivatives/atlas.md

  Show description for abe37b4
  

  jdkent

  and

  oesteban

  authored
  abe37b4

• incorporate meeting feedback in schema

  jdkent

  committed
  d812b08

Commits on Oct 7, 2024

• enh: add note about 'MNI Space' below template identifiers @CPernet

  oesteban

  committed
  3accb28

• enh: clarify the creation of BOTH a new template AND atlas

  Show description for e5e27f1
  oesteban

  committed
  e5e27f1

• fix: avoid using an atlas name for a segmentation label

  Show description for 8ffda51
  oesteban

  committed
  8ffda51

• enh: rework the text to clarify notions: atlas, template, space

  Show description for d62f0d9
  oesteban

  committed
  d62f0d9

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for 161db11
  pre-commit-ci[bot]

  committed
  161db11

Commits on Oct 11, 2024

• fix: addressing some inconsistencies about segmentations

  oesteban

  authored
  44cb808

• fix: add clarification about cohort

  Show description for c77df10
  

  oesteban

  and

  effigies

  authored
  c77df10

• fix: replace _mimap with _pet

  Show description for 947f279
  

  oesteban

  and

  melanieganz

  authored
  947f279

Commits on Oct 12, 2024

• fix: replace label- with seg- where applies

  oesteban

  authored
  a5111aa

• enh: update schema according to this proposal

  oesteban

  authored
  c05146c

• fix: folder -> directory (pacify pre-commit)

  oesteban

  authored
  f221ad0

• fix: order of scale- in the schema

  oesteban

  authored
  9ec94cd

• enh: refine atlas' definition in common principles

  Show description for 1a258b5
  

  oesteban

  and

  melanieganz

  authored
  1a258b5

• enh: add "authoritative definition of spaces" to template

  Show description for 79f1ea9
  

  oesteban

  and

  Paul Wighton

  authored
  79f1ea9

• enh: update schema to consider tpl- and cohort-

  Show description for 3f2bde5
  oesteban

  committed
  3f2bde5

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for 95a85a1
  pre-commit-ci[bot]

  committed
  95a85a1

• enh(schema): add atlas to entities

  oesteban

  authored
  0d7f965

• fix: delete photo from atlas' file rules

  oesteban

  authored
  a9fa24a

• Update src/schema/objects/columns.yaml

  Show description for 44c3ad8
  

  oesteban

  and

  effigies

  authored
  44c3ad8

Commits on Oct 14, 2024

• fix: dereference twice schema files

  oesteban

  committed
  b66c3ee

• fix: add missing properties to atlas entity definition

  oesteban

  committed
  c3b6f41

Commits on Oct 23, 2024

• FIX: update PET examples

  mnoergaard

  committed
  891bcf0

Commits on Nov 5, 2024

• Merge remote-tracking branch 'upstream/bep038' into bep038-review

  effigies

  committed
  ef1817b

• schema: Move templates out of rules.files

  effigies

  committed
  bc6b064

• test: Fix check to avoid overlap between common_principles and common

  effigies

  committed
  226f134

• schema: Update metaschema, fix errors caught by metaschema

  effigies

  committed
  ac745e6