[ENH] Render code blocks with language "tsv" as tables #1794
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effigies
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that's way quicker than anything I would have done I can try tweaking this to see if I can make it work |
Remi-Gau
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FWIW I think this is not an |
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that's fair |
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| ```tsv | ||
| session_id acq_time systolic_blood_pressure | ||
| ses-predrug 2009-06-15T13:45:30 120 | ||
| ses-postdrug 2009-06-16T13:45:30 100 |
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| ```tsv | ||
| filename acq_time | ||
| func/sub-control01_task-nback_bold.nii.gz 1877-06-15T13:45:30 | ||
| func/sub-control01_task-motor_bold.nii.gz 1877-06-15T13:55:33 |
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| ```tsv | ||
| session_id acq_time systolic_blood_pressure | ||
| ses-predrug 2009-06-15T13:45:30 120 | ||
| ses-postdrug 2009-06-16T13:45:30 100 |
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| ```tsv | ||
| trial response response_time stim_file | ||
| congruent red 1.435 images/word-red_color-red.jpg | ||
| incongruent red 1.739 images/word-red_color-blue.jpg |
| ```tsv | ||
| volume_type | ||
| control | ||
| label |
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| ```tsv | ||
| 34 110 0 | ||
| 44 112 0 | ||
| 23 100 1 | ||
| ``` |
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| ```tsv | ||
| onset duration trial_type response_time stim_file channel annots | ||
| 1.23 0.65 start 1.435 images/red_square.jpg n/a n/a | ||
| 5.65 0.65 stop 1.739 images/blue_square.jpg n/a n/a |
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| ```tsv | ||
| participant_id age sex handedness group | ||
| sub-01 34 M right read | ||
| sub-02 12 F right write | ||
| sub-03 33 F n/a read | ||
| ``` |
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| ```tsv | ||
| sample_id participant_id sample_type derived_from | ||
| sample-01 sub-01 tissue n/a | ||
| sample-02 sub-01 tissue sample-01 | ||
| sample-03 sub-01 tissue sample-01 | ||
| sample-04 sub-02 tissue n/a | ||
| sample-05 sub-02 tissue n/a | ||
| ``` |
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| ```tsv | ||
| time plasma_radioactivity whole_blood_radioactivity metabolite_parent_fraction metabolite_polar_fraction | ||
| 0 0 0 1 0 | ||
| 145 43.31 33.79 0.5749 0.1336 | ||
| 292 48.96 37.42 0.3149 0.2746 | ||
| 602 39.84 32.05 0.1469 0.3548 | ||
| 1248 37.38 31.52 0.073 0.444 | ||
| 1785 36.40 28.83 0.078 0.429 | ||
| 2390 33.13 26.32 0.061 0.453 | ||
| 3059 30.83 25.22 0.049 0.473 | ||
| 4196 27.28 21.98 0.036 0.503 | ||
| 5407 22.70 19.49 0.032 0.523 | ||
| 7193 19.71 15.70 0.02 0.559 | ||
| ``` |
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I guess original description should get this sentence crossed-out/removed?
It's not working 100% for me, but I've maxed out my time on this. Pushed to upstream so others can take it up or open PRs against it.
I have tested a cut on linux producing tab separated representation somehow, so as to me it is everything anyone could hope for.
Well done @effigies . Thanks for posting all previews!
| custom_fences: | ||
| - name: tsv | ||
| class: tsv | ||
| format: !!python/name:bidsschematools.render.tsv.fence |
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effigies
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Rendered: https://bids-specification--1794.org.readthedocs.build/en/1794/
This is another go at #644 along the lines of #1783 (comment).
It's not working 100% for me, but I've maxed out my time on this. Pushed to upstream so others can take it up or open PRs against it.The code for this does not need to live in bidsschematools, but that's the quickest way to get something into the import namespace.
cc @Remi-Gau