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Update magnetic-resonance-spectroscopy.md #1766

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Apr 9, 2024
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Update magnetic-resonance-spectroscopy.md #1766

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36 changes: 33 additions & 3 deletions src/modality-specific-files/magnetic-resonance-spectroscopy.md
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Expand Up @@ -17,11 +17,10 @@ context of the academic literature.
<!--
This block generates filename templates.
The inputs for this macro can be found in the directory
src/schema/rules/files
src/schema/rules/files/raw
and a guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->

{{ MACROS___make_filename_template("raw", datatypes=["mrs"], suffixes=["svs", "mrsi", "unloc", "mrsref"]) }}

MRS is a spectroscopic technique based on the phenomenon of nuclear magnetic resonance
Expand Down Expand Up @@ -152,11 +151,18 @@ The definitions of the fields specified in these tables may be found in
A guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->

{{ MACROS___make_sidecar_table("mrs.MRSScannerHardware") }}

#### Sequence specifics

<!-- This block generates a metadata table.
These tables are defined in
src/schema/rules/sidecars
The definitions of the fields specified in these tables may be found in
src/schema/objects/metadata.yaml
A guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->
{{ MACROS___make_sidecar_table("mrs.MRSSequenceSpecifics") }}

#### Tissue description
Expand All @@ -175,14 +181,38 @@ A guide for using macros can be found at

Metadata fields that MUST be present:

<!-- This block generates a metadata table.
These tables are defined in
src/schema/rules/sidecars
The definitions of the fields specified in these tables may be found in
src/schema/objects/metadata.yaml
A guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->
{{ MACROS___make_sidecar_table("mrs.MRSRequiredFields") }}

SHOULD be present:

<!-- This block generates a metadata table.
These tables are defined in
src/schema/rules/sidecars
The definitions of the fields specified in these tables may be found in
src/schema/objects/metadata.yaml
A guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->
{{ MACROS___make_sidecar_table("mrs.MRSRecommendedFields") }}

MAY be present:

<!-- This block generates a metadata table.
These tables are defined in
src/schema/rules/sidecars
The definitions of the fields specified in these tables may be found in
src/schema/objects/metadata.yaml
A guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->
{{ MACROS___make_sidecar_table("mrs.MRSOptionalFields") }}

### Example `*_svs.json`
Expand Down