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[ENH] Allow .bval and .bvec files for pepolar fmaps #1754

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Apr 24, 2024
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1 change: 1 addition & 0 deletions src/appendices/contributors.md
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Expand Up @@ -257,6 +257,7 @@ If you contributed to the BIDS ecosystem and your name is not listed, please add
| Mateusz Pawlik | 📖🐛🤔🚧👀 |
| Mathias Goncalves | 💻🔧📢 |
| Mathieu Boudreau | 💬🤔📢 |
| Matt Cieslak | 📖 |
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| Matt Sanderson | 📖💻 |
| Matteo Tonietto | 📖 |
| Matthias Günther | 📖 |
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Expand Up @@ -1254,6 +1254,7 @@ EPI scans with different phase encoding directions to estimate the distortion
map corresponding to the nonuniformities of the *B<sub>0</sub>* field.
These `*_epi.nii[.gz]` - or `*_m0scan.nii[.gz]` for arterial spin labeling perfusion data - files can be 3D or 4D --
in the latter case, all timepoints share the same scanning parameters.
Some 4D scans intended for correcting DWIs may have accompanying `*_epi.bval` and `*_epi.bvec` files.
Examples of software tools using these kinds of images are FSL TOPUP and
AFNI `3dqwarp`.

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7 changes: 7 additions & 0 deletions src/schema/rules/files/deriv/preprocessed_data.yaml
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Expand Up @@ -104,6 +104,13 @@ fmap_pepolar_common:
space: optional
description: optional

fmap_pepolar_m0scan:
$ref: rules.files.raw.fmap.pepolar_m0scan
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entities:
$ref: rules.files.raw.fmap.pepolar.entities
space: optional
description: optional

fmap_TB1DAM_common:
$ref: rules.files.raw.fmap.TB1DAM
entities:
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20 changes: 20 additions & 0 deletions src/schema/rules/files/raw/fmap.yaml
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Expand Up @@ -24,6 +24,26 @@ fieldmaps:
pepolar:
suffixes:
- epi
extensions:
- .nii.gz
- .nii
- .json
- .bval
- .bvec
datatypes:
- fmap
entities:
subject: required
session: optional
acquisition: optional
ceagent: optional
direction: required
run: optional
part: optional
chunk: optional

pepolar_m0scan:
suffixes:
- m0scan
extensions:
- .nii.gz
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