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Use specific version of validator for now, and redid validation of ex…
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…amples, point to the schema correctly for running tests
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yarikoptic committed Apr 19, 2024
1 parent 3462ad0 commit ec75517
Showing 1 changed file with 8 additions and 3 deletions.
11 changes: 8 additions & 3 deletions .github/workflows/validate_bids-examples.yml
Original file line number Diff line number Diff line change
Expand Up @@ -57,8 +57,13 @@ jobs:
if: "matrix.bids-validator == 'master-deno'"
run: |
pushd ..
# Let's use specific commit for now
# TODO: progress it once in a while
commit=a7b291b882a8c6184219ccb84faae255ba96203a
git clone --depth 1 https://github.com/bids-standard/bids-validator
echo -e '#!/bin/sh\n'"$PWD/bids-validator/bids-validator/bids-validator-deno \"\$@\"" >| /usr/local/bin/bids-validator
cd bids-validator
git fetch --depth 1 origin $commit;
echo -e '#!/bin/sh\n'"$PWD/bids-validator/bids-validator-deno \"\$@\"" >| /usr/local/bin/bids-validator
chmod a+x /usr/local/bin/bids-validator
which -a bids-validator
bids-validator --help
Expand All @@ -84,7 +89,7 @@ jobs:
path: bids-examples

- name: Mark known not yet to be deno-legit BIDS datasets
run: touch {ds000117,ds000248,eeg_ds003645s_hed_demo,ieeg_epilepsy,ieeg_epilepsy_ecog,ieeg_epilepsyNWB,ieeg_visual_multimodal}/.SKIP_VALIDATION
run: touch {ds000117,ds000246,ds000247,ds000248,eeg_ds003645s_hed_demo,ieeg_motorMiller2007,ieeg_visual}/.SKIP_VALIDATION
shell: bash
working-directory: bids-examples

Expand All @@ -102,5 +107,5 @@ jobs:
working-directory: bids-examples

- name: Validate all BIDS datasets using bids-validator after migration
run: VALIDATOR_ARGS="-s local" bash ./run_tests.sh
run: VALIDATOR_ARGS="--schema file://$PWD/src/schema.json" bash ./run_tests.sh
working-directory: bids-examples

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