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Add ephys channel count rules to schema (#1319)
* schema: add EEG channel count rules * Update src/schema/rules/checks/eeg.yaml Co-authored-by: Chris Markiewicz <[email protected]> * add issues * add missing quotation mark * fix again --------- Co-authored-by: Chris Markiewicz <[email protected]>
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,79 @@ | ||
| --- | ||
| EEGChannelCountReq: | ||
| issue: | ||
| code: EEG_CHANNEL_COUNT_MISMATCH | ||
| message: | | ||
| The EEGChannelCount metadata does not match the number of channels | ||
| with type EEG in the associated channels.tsv file. | ||
| level: warning | ||
| selectors: | ||
| - suffix == "eeg" | ||
| - type(sidecar.EEGChannelCount) != "null" | ||
| - associations.channels.type | ||
| checks: | ||
| - sidecar.EEGChannelCount == count(associations.channels.type, "EEG") | ||
| ECGChannelCountReq: | ||
| issue: | ||
| code: ECG_CHANNEL_COUNT_MISMATCH | ||
| message: | | ||
| The ECGChannelCount metadata does not match the number of channels | ||
| with type ECG in the associated channels.tsv file. | ||
| level: warning | ||
| selectors: | ||
| - suffix == "eeg" | ||
| - type(sidecar.ECGChannelCount) != "null" | ||
| - associations.channels.type | ||
| checks: | ||
| - sidecar.ECGChannelCount == count(associations.channels.type, "ECG") | ||
| EMGChannelCountReq: | ||
| issue: | ||
| code: EMG_CHANNEL_COUNT_MISMATCH | ||
| message: | | ||
| The EMGChannelCount metadata does not match the number of channels | ||
| with type EMG in the associated channels.tsv file. | ||
| level: warning | ||
| selectors: | ||
| - suffix == "eeg" | ||
| - type(sidecar.EMGChannelCount) != "null" | ||
| - associations.channels.type | ||
| checks: | ||
| - sidecar.EMGChannelCount == count(associations.channels.type, "EMG") | ||
| EOGChannelCountReq: | ||
| issue: | ||
| code: EOG_CHANNEL_COUNT_MISMATCH | ||
| message: | | ||
| The EOGChannelCount metadata does not match the number of channels | ||
| with type EOG in the associated channels.tsv file. | ||
| level: warning | ||
| selectors: | ||
| - suffix == "eeg" | ||
| - type(sidecar.EOGChannelCount) != "null" | ||
| - associations.channels.type | ||
| checks: | ||
| - sidecar.EOGChannelCount == count(associations.channels.type, "EOG") | ||
| MiscChannelCountReq: | ||
| issue: | ||
| code: MISC_CHANNEL_COUNT_MISMATCH | ||
| message: | | ||
| The MiscChannelCount metadata does not match the number of channels | ||
| with type MISC in the associated channels.tsv file. | ||
| level: warning | ||
| selectors: | ||
| - suffix == "eeg" | ||
| - type(sidecar.MiscChannelCount) != "null" | ||
| - associations.channels.type | ||
| checks: | ||
| - sidecar.MiscChannelCount == count(associations.channels.type, "MISC") | ||
| TriggerChannelCountReq: | ||
| issue: | ||
| code: TRIGGER_CHANNEL_COUNT_MISMATCH | ||
| message: | | ||
| The TriggerChannelCount metadata does not match the number of channels | ||
| with type TRIG in the associated channels.tsv file. | ||
| level: warning | ||
| selectors: | ||
| - suffix == "eeg" | ||
| - type(sidecar.TriggerChannelCount) != "null" | ||
| - associations.channels.type | ||
| checks: | ||
| - sidecar.TriggerChannelCount == count(associations.channels.type, "TRIG") |