Merge pull request #2004 from Remi-Gau/fix/2003

[FIX] update some internal links

src/derivatives/imaging.md

@@ -229,7 +229,7 @@ vertices) or a combined volume/surface space.
 
 If the segmentation can be generated in different ways,
 for example, following an atlas segmentation,
-the [`seg` entity](../appendices/entities.md#segmentation) MAY be used to
+the [`seg` entity](../appendices/entities.md#seg) MAY be used to
 distinguish the name of the segmentation used.
 
 The following section describes discrete and probabilistic segmentations of
@@ -293,7 +293,7 @@ In this case, the mask suffix MUST be used,
 the [`label` entity](../appendices/entities.md#label) SHOULD be used
 to specify the masked structure
 (see [Common image-derived labels](#common-image-derived-labels)),
-and the [`seg` entity](../appendices/entities.md#segmentation) SHOULD be defined.
+and the [`seg` entity](../appendices/entities.md#seg) SHOULD be defined.
 
 For example:
 

src/modality-specific-files/behavioral-experiments.md

@@ -44,7 +44,7 @@ and a guide for using macros can be found at
 
 In addition to the metadata that is either:
 
--   RECOMMENDED for sidecar JSON files for [tabular data](../common-principles.md#tabular-data), or
+-   RECOMMENDED for sidecar JSON files for [tabular data](../common-principles.md#tabular-files), or
 
 -   REQUIRED for some data that can be found in the `beh` directory
     (for example `SamplingFrequency` and `StartTime` for `*_<physio|stim>.tsv.gz` files),

src/modality-specific-files/electroencephalography.md

@@ -272,7 +272,7 @@ Examples of free-form text for field `description`
 
 ### Example `*_channels.tsv`
 
-See also the corresponding [`electrodes.tsv` example](#example-electrodestsv).
+See also the corresponding [`electrodes.tsv` example](#example-_electrodestsv).
 
 ```Text
 name     type  units  description                     reference     status  status_description
@@ -316,7 +316,7 @@ If electrodes are repositioned, it is RECOMMENDED to use multiple sessions to in
 
 ### Example `*_electrodes.tsv`
 
-See also the corresponding [`electrodes.tsv` example](#example-channelstsv).
+See also the corresponding [`channels.tsv` example](#example-_channelstsv).
 
 ```Text
 name   x        y	       z        type     material

src/modality-specific-files/magnetic-resonance-imaging-data.md

@@ -11,7 +11,7 @@ MRI acquisition parameters are divided into several categories based on
 When adding additional metadata please use the CamelCase version of
 [DICOM ontology terms](https://dicom.nema.org/medical/dicom/current/output/chtml/part16/chapter_d.html)
 whenever possible. See also
-[recommendations on JSON files](../common-principles.md#keyvalue-files-dictionaries).
+[recommendations on JSON files](../common-principles.md#key-value-files-dictionaries).
 
 ### Hardware information
 
@@ -1354,6 +1354,6 @@ See [Using `IntendedFor` metadata](#using-intendedfor-metadata)
 for details on the `IntendedFor` field.
 
 As for other EPI sequences, these field mapping sequences may have any of the
-[in-plane spatial encoding](#in-plane-spatial-encoding) metadata keys.
+[in-plane spatial encoding](#in-and-out-of-plane-spatial-encoding) metadata keys.
 However, please note that `PhaseEncodingDirection` and `TotalReadoutTime` keys
 are REQUIRED for these field mapping sequences.

src/modality-specific-files/magnetoencephalography.md

@@ -187,7 +187,7 @@ A guide for using macros can be found at
 
 #### Specific EEG fields
 
-If recorded with MEG, see [Recording EEG simultaneously with MEG](#recording-eeg-simultaneously-with-meg)
+If recorded with MEG, see [Recording EEG simultaneously with MEG](#recording-ieeg-simultaneously-with-meg)
 SHOULD be present:
 
 <!-- This block generates a metadata table.

src/schema/objects/entities.yaml

@@ -275,7 +275,7 @@ run:
     (only nonnegative integers are allowed as run indices).
 
     If different entities apply,
-    such as a different session indicated by [`ses-<label>`][SPEC_ROOT/appendices/entities.md#ses),
+    such as a different session indicated by [`ses-<label>`](SPEC_ROOT/appendices/entities.md#ses),
     or different acquisition parameters indicated by
     [`acq-<label>`](SPEC_ROOT/appendices/entities.md#acq),
     then `run` is not needed to distinguish the scans and MAY be omitted.

src/schema/rules/json/meg.yaml

@@ -20,15 +20,15 @@ MEGCoordsystemWithEEG:
       level: optional
       description_addendum: |
         See [Recording EEG simultaneously with MEG]
-        (/modality-specific-files/magnetoencephalography.html#recording-eeg-simultaneously-with-meg).
+        (/modality-specific-files/magnetoencephalography.html#recording-ieeg-simultaneously-with-meg).
         Preferably the same as the `MEGCoordinateSystem`.
     EEGCoordinateUnits: optional
     EEGCoordinateSystemDescription:
       level: optional
       level_addendum: required if `EEGCoordinateSystem` is `Other`
       description_addendum: |
         See [Recording EEG simultaneously with MEG]
-        (/modality-specific-files/magnetoencephalography.html#recording-eeg-simultaneously-with-meg).
+        (/modality-specific-files/magnetoencephalography.html#recording-ieeg-simultaneously-with-meg).
 
 MEGCoordsystemWithEEGMEGCoordinateSystem:
   selectors: