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Validation

[ENH] Render code blocks with language "tsv" as tables #2527

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[ENH] Render code blocks with language "tsv" as tables

[ENH] Render code blocks with language "tsv" as tables #2527

Workflow file for this run

.github/workflows/validation.yml at a49088a
---
name: Validation
on:
push:
branches: [master]
pull_request:
branches: [master]
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
# Check for common misspellings
codespell:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: codespell-project/actions-codespell@master
# Markdown formatting
remark:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: 22
- name: Install dependencies
run: npm install `cat npm-requirements.txt`
- name: Run style checks
run: npx remark src/**/*.md --frail --rc-path .remarkrc
# YAML
yamllint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3
- name: Install dependencies
run: pip install yamllint
- name: Lint yml files in src/schema
run: yamllint -f standard src/schema/ -c .yamllint.yml
# Python best practices
python-style:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3
- run: python -m pip install --upgrade flake8 black isort[colors]
- run: black --diff --color --check tools/schemacode
- run: isort --diff --color --check tools/schemacode
- run: flake8
working-directory: tools/schemacode
# Avoid Latin phrases to improve readability
latin-phrases:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install -r tools/requirements.txt
- name: Run Python script to check for Latin phrases - Master
if: github.event_name == 'push' && github.ref == 'refs/heads/master'
run: |
python no-bad-latin.py
working-directory: tools
- name: Run Python script to check for Latin phrases - Pull Request
if: github.event.pull_request
run: |
python no-bad-latin.py
working-directory: tools
# Validate CITATION.cff
validate_cff:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip3 install cffconvert
- name: Validate CITATION.cff
run: make validate_citation_cff