Injected schema 1.1.0-dev for BIDS 1.10.1-dev as of commit v1.10.0+96…

…-g00917e62 into versions/master

versions/master/BIDS_VERSION_LASTEDIT

@@ -1 +1 @@
-v1.10.0+78-g163ad28f
+v1.10.0+96-g00917e62

versions/master/schema/objects/entities.yaml

@@ -275,7 +275,7 @@ run:
     (only nonnegative integers are allowed as run indices).
 
     If different entities apply,
-    such as a different session indicated by [`ses-<label>`][SPEC_ROOT/appendices/entities.md#ses),
+    such as a different session indicated by [`ses-<label>`](SPEC_ROOT/appendices/entities.md#ses),
     or different acquisition parameters indicated by
     [`acq-<label>`](SPEC_ROOT/appendices/entities.md#acq),
     then `run` is not needed to distinguish the scans and MAY be omitted.

versions/master/schema/rules/checks/asl.yaml

@@ -47,7 +47,7 @@ ASLFlipAngleNiftiLength:
     message: |
       The number of values for 'FlipAngle' for this file does not match the 4th dimension of the NIfTI header.
       'FlipAngle' is the flip angle (FA) for the acquisition, specified in degrees.
-      Corresponds to: DICOM Tag 0018, 1314 `Flip Angle`.
+      Corresponds to: [DICOM Tag 0018, 1314](https://dicomlookup.com/dicomtags/(0018,1314)) `Flip Angle`.
       The data type number may apply to files from any MRI modality concerned with a single value for this field,
       or to the files in a file collection where the value of this field is iterated using the flip entity.
       The data type array provides a value for each volume in a 4D dataset and should only be used when the
@@ -70,7 +70,7 @@ ASLFlipAngleASLContextLength:
       The number of values for 'FlipAngle' for this file does not match the number of volumes in the
       associated 'aslcontext.tsv'.
       'FlipAngle' is the flip angle (FA) for the acquisition, specified in degrees.
-      Corresponds to: DICOM Tag 0018, 1314 `Flip Angle`.
+      Corresponds to: [DICOM Tag 0018, 1314](https://dicomlookup.com/dicomtags/(0018,1314)) `Flip Angle`.
       The data type number may apply to files from any MRI modality concerned with a single value for this field,
       or to the files in a file collection where the value of this field is iterated using the flip entity.
       The data type array provides a value for each volume in a 4D dataset and should only be used when the volume

versions/master/schema/rules/json/meg.yaml

@@ -20,15 +20,15 @@ MEGCoordsystemWithEEG:
       level: optional
       description_addendum: |
         See [Recording EEG simultaneously with MEG]
-        (/modality-specific-files/magnetoencephalography.html#recording-eeg-simultaneously-with-meg).
+        (/modality-specific-files/magnetoencephalography.html#recording-ieeg-simultaneously-with-meg).
         Preferably the same as the `MEGCoordinateSystem`.
     EEGCoordinateUnits: optional
     EEGCoordinateSystemDescription:
       level: optional
       level_addendum: required if `EEGCoordinateSystem` is `Other`
       description_addendum: |
         See [Recording EEG simultaneously with MEG]
-        (/modality-specific-files/magnetoencephalography.html#recording-eeg-simultaneously-with-meg).
+        (/modality-specific-files/magnetoencephalography.html#recording-ieeg-simultaneously-with-meg).
 
 MEGCoordsystemWithEEGMEGCoordinateSystem:
   selectors:

versions/master/schema/rules/sidecars/mri.yaml

@@ -13,19 +13,24 @@ MRIHardware:
   fields:
     Manufacturer:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0070 `Manufacturer`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0070](https://dicomlookup.com/dicomtags/(0008,0070)) `Manufacturer`.
     ManufacturersModelName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 1090 `Manufacturers Model Name`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 1090](https://dicomlookup.com/dicomtags/(0008,1090)) `Manufacturers Model Name`.
     DeviceSerialNumber:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0018, 1000 `DeviceSerialNumber`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 1000](https://dicomlookup.com/dicomtags/(0018,1000)) `DeviceSerialNumber`.
     StationName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 1010 `Station Name`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 1010](https://dicomlookup.com/dicomtags/(0008,1010)) `Station Name`.
     SoftwareVersions:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0018, 1020 `Software Versions`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 1020](https://dicomlookup.com/dicomtags/(0018,1020)) `Software Versions`.
     HardcopyDeviceSoftwareVersion: deprecated
     MagneticFieldStrength:
       level: recommended
@@ -62,7 +67,8 @@ MRISample:
   fields:
     BodyPart:
       level: optional
-      description_addendum: Corresponds to DICOM Tag 0018, 0015 `Body Part Examined`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 0015](https://dicomlookup.com/dicomtags/(0018,0015)) `Body Part Examined`.
     BodyPartDetails: optional
     BodyPartDetailsOntology: optional
 
@@ -87,7 +93,8 @@ MRISequenceSpecifics:
         echo EPI"`.
     ScanningSequence:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0018, 0020 `Scanning Sequence`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 0020](https://dicomlookup.com/dicomtags/(0018,0020)) `Scanning Sequence`.
     SequenceVariant: recommended
     ScanOptions: recommended
     SequenceName: recommended
@@ -325,7 +332,7 @@ MRIFlipAngleLookLockerTrue:
           You should define 'FlipAngle' for this file, in
           case of a LookLocker acquisition. 'FlipAngle' is the
           flip angle (FA) for the acquisition, specified in degrees.
-          Corresponds to: DICOM Tag 0018, 1314 `Flip Angle`. The data
+          Corresponds to: [DICOM Tag 0018, 1314](https://dicomlookup.com/dicomtags/(0018,1314)) `Flip Angle`. The data
           type number may apply to files from any MRI modality concerned
           with a single value for this field, or to the files in a file
           collection where the value of this field is iterated using the
@@ -371,13 +378,17 @@ MRIInstitutionInformation:
   fields:
     InstitutionName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0080 `InstitutionName`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0080](https://dicomlookup.com/dicomtags/(0008,0080)) `InstitutionName`.
     InstitutionAddress:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0081 `InstitutionAddress`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0081](https://dicomlookup.com/dicomtags/(0008,0081)) `InstitutionAddress`.
     InstitutionalDepartmentName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 1040 `Institutional Department Name`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 1040](https://dicomlookup.com/dicomtags/(0008,1040))
+        `Institutional Department Name`.
 
 DeidentificationMethod:
   selectors:
@@ -386,7 +397,10 @@ DeidentificationMethod:
   fields:
     DeidentificationMethod:
       level: optional
-      description_addendum: Corresponds to DICOM Tag 0012, 0063 `De-identification Method`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0012, 0063](https://dicomlookup.com/dicomtags/(0012,0063)) `De-identification Method`.
     DeidentificationMethodCodeSequence:
       level: optional
-      description_addendum: Corresponds to DICOM Tag 0012, 0064 `De-identification Method Code Sequence`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0012, 0064](https://dicomlookup.com/dicomtags/(0012,0064))
+        `De-identification Method Code Sequence`.

versions/master/schema/rules/sidecars/mrs.yaml

@@ -39,7 +39,8 @@ MRSSample:
     BodyPart:
       level: optional
       level_addendum: required if `voi` entity is present
-      description_addendum: Corresponds to DICOM Tag 0018, 0015 `Body Part Examined`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 0015](https://dicomlookup.com/dicomtags/(0018,0015)) `Body Part Examined`.
     BodyPartDetails:
       level: optional
       level_addendum: required if `voi` entity is present

versions/master/schema/rules/sidecars/pet.yaml

@@ -7,18 +7,21 @@ PETHardware:
   fields:
     Manufacturer:
       level: required
-      description_addendum: Corresponds to DICOM Tag 0008, 0070 `Manufacturer`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0070](https://dicomlookup.com/dicomtags/(0008,0070)) `Manufacturer`.
     ManufacturersModelName:
       level: required
-      description_addendum: Corresponds to DICOM Tag 0008, 1090 `Manufacturers Model Name`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 1090](https://dicomlookup.com/dicomtags/(0008,1090)) `Manufacturers Model Name`.
     Units:
       level: required
       description_addendum: |
         SI unit for radioactivity (Becquerel) should be used (for example, "Bq/mL").
-        Corresponds to DICOM Tag 0054, 1001 `Units`.
+        Corresponds to [DICOM Tag 0054, 1001](https://dicomlookup.com/dicomtags/(0054,1001)) `Units`.
     BodyPart:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0018, 0015 `Body Part Examined`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 0015](https://dicomlookup.com/dicomtags/(0018,0015)) `Body Part Examined`.
 
 PETInstitutionInformation:
   selectors:
@@ -27,13 +30,17 @@ PETInstitutionInformation:
   fields:
     InstitutionName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0080 `InstitutionName`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0080](https://dicomlookup.com/dicomtags/(0008,0080)) `InstitutionName`.
     InstitutionAddress:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0081 `InstitutionAddress`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0081](https://dicomlookup.com/dicomtags/(0008,0081)) `InstitutionAddress`.
     InstitutionalDepartmentName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 1040 `Institutional Department Name`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 1040](https://dicomlookup.com/dicomtags/(0008,1040))
+        `Institutional Department Name`.
 
 PETSample:
   selectors:
@@ -42,7 +49,8 @@ PETSample:
   fields:
     BodyPart:
       level: optional
-      description_addendum: Corresponds to DICOM Tag 0018, 0015 `Body Part Examined`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 0015](https://dicomlookup.com/dicomtags/(0018,0015)) `Body Part Examined`.
     BodyPartDetails: optional
     BodyPartDetailsOntology: optional
 
@@ -114,10 +122,12 @@ PETPharmaceuticals:
   fields:
     PharmaceuticalName:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0034 `Intervention Drug Name`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0034](https://dicomlookup.com/dicomtags/(0008,0034)) `Intervention Drug Name`.
     PharmaceuticalDoseAmount:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0008, 0028 `Intervention Drug Dose`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0028](https://dicomlookup.com/dicomtags/(0008,0028)) `Intervention Drug Dose`.
     PharmaceuticalDoseUnits: recommended
     PharmaceuticalDoseRegimen: recommended
     PharmaceuticalDoseTime:
@@ -136,17 +146,20 @@ PETTime:
     ScanStart: required
     InjectionStart:
       level: required
-      description_addendum: Corresponds to DICOM Tag 0018, 1072 `Radiopharmaceutical Start Time`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0018, 1072](https://dicomlookup.com/dicomtags/(0018,1072))
+        `Radiopharmaceutical Start Time`.
     FrameTimesStart: required
     FrameDuration: required
     InjectionEnd:
       level: recommended
       description_addendum: |
-        Corresponds to DICOM Tag 0018, 1073 `Radiopharmaceutical Stop Time`
-        converted to seconds relative to TimeZero.
+        Corresponds to [DICOM Tag 0018, 1073](https://dicomlookup.com/dicomtags/(0018,1073))
+        `Radiopharmaceutical Stop Time` converted to seconds relative to TimeZero.
     ScanDate:
       level: deprecated
-      description_addendum: Corresponds to DICOM Tag 0008, 0022 `Acquisition Date`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0008, 0022](https://dicomlookup.com/dicomtags/(0008,0022)) `Acquisition Date`.
 
 PETReconstruction:
   selectors:
@@ -158,40 +171,57 @@ PETReconstruction:
     ImageDecayCorrectionTime: required
     ReconMethodName:
       level: required
-      description_addendum: This partly matches the DICOM Tag 0054, 1103 `Reconstruction Method`.
+      description_addendum: |
+        This partly matches the [DICOM Tag 0054, 1103](https://dicomlookup.com/dicomtags/(0054,1103))
+        `Reconstruction Method`.
     ReconMethodParameterLabels:
       level: required
-      description_addendum: This partly matches the DICOM Tag 0054, 1103 `Reconstruction Method`.
+      description_addendum: |
+        This partly matches the [DICOM Tag 0054, 1103](https://dicomlookup.com/dicomtags/(0054,1103))
+        `Reconstruction Method`.
     ReconMethodParameterUnits:
       level: recommended
       level_addendum: required if `ReconMethodParameterLabels` does not contain `"none"`
-      description_addendum: This partly matches the DICOM Tag 0054, 1103 `Reconstruction Method`.
+      description_addendum: |
+        This partly matches the [DICOM Tag 0054, 1103](https://dicomlookup.com/dicomtags/(0054,1103))
+        `Reconstruction Method`.
     ReconMethodParameterValues:
       level: recommended
       level_addendum: required if `ReconMethodParameterLabels` does not contain `"none"`
-      description_addendum: This partly matches the DICOM Tag 0054, 1103 `Reconstruction Method`.
+      description_addendum: |
+        This partly matches the [DICOM Tag 0054, 1103](https://dicomlookup.com/dicomtags/(0054,1103))
+        `Reconstruction Method`.
     ReconFilterType:
       level: required
-      description_addendum: This partly matches the DICOM Tag 0018, 1210 `Convolution Kernel`.
+      description_addendum: |
+        This partly matches the [DICOM Tag 0018, 1210](https://dicomlookup.com/dicomtags/(0018,1210))
+        `Convolution Kernel`.
     ReconFilterSize:
       level: recommended
       level_addendum: required if `ReconFilterType` is not `"none"`
-      description_addendum: This partly matches the DICOM Tag 0018, 1210 `Convolution Kernel`.
+      description_addendum: |
+        This partly matches the [DICOM Tag 0018, 1210](https://dicomlookup.com/dicomtags/(0018,1210))
+        `Convolution Kernel`.
     AttenuationCorrection:
       level: required
-      description_addendum: This corresponds to DICOM Tag 0054, 1101 `Attenuation Correction Method`.
+      description_addendum: |
+        This corresponds to [DICOM Tag 0054, 1101](https://dicomlookup.com/dicomtags/(0054,1101))
+        `Attenuation Correction Method`.
     ReconMethodImplementationVersion: recommended
     AttenuationCorrectionMethodReference: recommended
     ScaleFactor: recommended
     ScatterFraction:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0054, 1323 `Scatter Fraction Factor`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0054, 1323](https://dicomlookup.com/dicomtags/(0054,1323)) `Scatter Fraction Factor`.
     DecayCorrectionFactor:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0054, 1321 `Decay Factor`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0054, 1321](https://dicomlookup.com/dicomtags/(0054,1321)) `Decay Factor`.
     DoseCalibrationFactor:
       level: recommended
-      description_addendum: Corresponds to DICOM Tag 0054, 1322 `Dose Calibration Factor`.
+      description_addendum: |
+        Corresponds to [DICOM Tag 0054, 1322](https://dicomlookup.com/dicomtags/(0054,1322)) `Dose Calibration Factor`.
     PromptRate: recommended
     SinglesRate: recommended
     RandomRate: recommended