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feat: handle unspecified UTR feature naming #7

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merged 1 commit into from
May 23, 2024
Merged

feat: handle unspecified UTR feature naming #7

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2 changes: 2 additions & 0 deletions bento_reference_service/features.py
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Original file line number Diff line number Diff line change
Expand Up @@ -95,6 +95,8 @@ def extract_feature_name(record, attributes: dict[str, list[str]]) -> str | None
return f"{transcript_name} 5' UTR" if transcript_name else None
case "3utr" | "three_prime_utr": # 3' untranslated region (UTR)
return f"{transcript_name} 3' UTR" if transcript_name else None
case "utr": # unspecified untranslated region (UTR)
return f"{transcript_name} UTR" if transcript_name else None
case "start_codon":
return f"{transcript_name} start codon" if transcript_name else None
case "stop_codon":
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