Merge branch 'bids-standard:master' into master #7
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name: nidm_examples parsed to bids-prov from spm and fsl parser | |
on: | |
push: | |
paths: | |
- 'context.json' | |
- 'bids_prov/**' | |
- 'examples/from_parsers/**' | |
jobs: | |
run: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@master | |
- name: Setup Python | |
uses: actions/setup-python@master | |
with: | |
python-version: 3.10.6 | |
repo-token: ${{ secrets.GITHUB_TOKEN }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install pytest | |
pip install -r dev-requirements.txt | |
sudo apt-get install graphviz | |
- name: SPM/FSL/AFNI parsing on nidm-examples | |
run: | | |
./fetch_nidmresults-examples | |
./launch_parser_on_nidm.py --input_dir nidmresults-examples --output_dir examples/from_parsers | |
- name: push on the repo the dir "examples/from_parsers" | |
run: | | |
git config user.name "GitHub Actions Bot" | |
git config user.email "<>" | |
git add examples/from_parsers | |
git commit -m "automated nidm example computation from github action " | |
git push |