feat: Zscores instead of kIQR for various views, fixed typos

DEVSU-2039
bcgsc · Oct 20, 2023 · b50eaa2 · b50eaa2
1 parent 9c87e3c
commit b50eaa2
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Showing 4 changed files with 4 additions and 7 deletions.
diff --git a/app/views/ReportView/components/Expression/columnDefs.ts b/app/views/ReportView/components/Expression/columnDefs.ts
@@ -19,7 +19,7 @@ const columnDefs: Array<ColDef | ColGroupDef> = [{
   headerName: 'Disease',
   children: [
     { headerName: 'Perc', field: 'diseasePercentile', hide: false },
-    { headerName: 'kIQR', field: 'diseasekIQR', hide: false },
+    { headerName: 'kIQR', field: 'diseasekIQR', hide: true },
     { headerName: 'QC', field: 'diseaseQC', hide: false },
     { headerName: 'FC', field: 'diseaseFoldChange', hide: true },
     { headerName: 'Z-Score', field: 'diseaseZScore', hide: false },

diff --git a/app/views/ReportView/components/SmallMutations/index.tsx b/app/views/ReportView/components/SmallMutations/index.tsx
@@ -68,7 +68,7 @@ const SmallMutations = ({
             for (const {
               gene: {
                 expressionVariants: {
-                  tpm, rpkm, primarySiteFoldChange, diseasekIQR,
+                  tpm, rpkm, primarySiteFoldChange,
                 },
               },
             } of filteredSmallMutResp) {

diff --git a/app/views/ReportView/components/StructuralVariants/columnDefs.ts b/app/views/ReportView/components/StructuralVariants/columnDefs.ts
@@ -78,8 +78,8 @@ const columnDefs = [{
   hide: true,
 }, {
   headerName: 'Expression (Z-score) 5`/3',
-  colId: 'primarySiteZscore',
-  valueGetter: createGeneRelatedValueGetter('expressionVariants', ' / ', 'primarySiteZscore'),
+  colId: 'primarySiteZScore',
+  valueGetter: createGeneRelatedValueGetter('expressionVariants', ' / ', 'primarySiteZScore'),
   hide: false,
 }, {
   headerName: 'Oncogene',

diff --git a/app/views/ReportView/components/StructuralVariants/index.tsx b/app/views/ReportView/components/StructuralVariants/index.tsx
@@ -103,9 +103,6 @@ const StructuralVariants = ({
               if ((primarySiteFoldChange1 !== null || primarySiteFoldChange2 !== null) && !nextVisible.includes('primarySiteFoldChange')) {
                 nextVisible.push('primarySiteFoldChange');
               }
-              if ((primarySitekIQR1 !== null || primarySitekIQR2 !== null) && !nextVisible.includes('primarySitekIQR')) {
-                nextVisible.push('primarySitekIQR');
-              }
               if (nextVisible.length === 2) {
                 break;
               }