Merge pull request #101 from bcgsc/bugfix/KBDEV-1081-structural-varia…

…nt-threshold Fix threshold for structural variants
bcgsc · Aug 31, 2023 · bb07069 · bb07069
2 parents 6e44017 + f639044
commit bb07069
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/graphkb/constants.py b/graphkb/constants.py
@@ -175,7 +175,7 @@ def __getitem__(self, key):
 
 # For match.type_screening() [KBDEV-1056]
 DEFAULT_NON_STRUCTURAL_VARIANT_TYPE = 'mutation'
-STRUCTURAL_VARIANT_SIZE_THRESHOLD = 50  # bp
+STRUCTURAL_VARIANT_SIZE_THRESHOLD = 48  # bp
 STRUCTURAL_VARIANT_TYPES = [
     "structural variant",
     "insertion",