This pipeline is still being constructed as I work through the pre and post-processing of genomic data.
A step-by-step computational pipeline for processing low-coverage whole genome sequences.
This pipeline is based on the work done by the Therkildsen Lab (https://github.com/therkildsen-lab), Nina Overgaard Therkildsen (https://github.com/nt246), and Nicolas Lou (https://github.com/nicolas931010) from the following repositories: lcwgs-guide-tutorial - https://github.com/nt246/lcwgs-guide-tutorial/tree/main genomic-data-analysis - https://github.com/therkildsen-lab/genomic-data-analysis/tree/master