Update ensemble_inference_and_evaluation.sh

Fixed the description of the first argument of ensemble_inference_and_evaluation.sh
axondeepseg · Apr 4, 2024 · 5b4d57c · 5b4d57c
1 parent 993a290
commit 5b4d57c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/nnunet_scripts/ensemble_inference_and_evaluation.sh b/nnunet_scripts/ensemble_inference_and_evaluation.sh
@@ -1,4 +1,4 @@
-# The first argument should be the path to the datasets.
+# The first argument should be the path to the nnunet folder.
 # The remaining arguments should be the names of the datasets to process.
 NNUNET_PATH=$1
 DATASET_NAME="Dataset444_AGG"
@@ -33,4 +33,4 @@ python nnunet_scripts/run_evaluation.py --pred_path ${NNUNET_PATH}/nnUNet_result
                                         --mapping_path ${NNUNET_PATH}/nnUNet_raw/${DATASET_NAME}/fname_mapping.json \
                                         --gt_path ${NNUNET_PATH}/test_labels \
                                         --output_fname ${NNUNET_PATH}/nnUNet_results/${DATASET_NAME}/ensemble_models/scores/${ensemble_name}_model_best_checkpoints_scores \
-                                        --pred_suffix _0000
+                                        --pred_suffix _0000