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  1. LDhat LDhat Public

    Estimate recombination rates from population genetic data

    C 60 20

  2. LDhot LDhot Public

    Detect recombination hotspots using population genetic data.

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  3. interference interference Public

    MATLAB code for estimating crossover interference under the Housworth-Stahl model.

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  4. viterbi viterbi Public

    Find shared haplotypes between individuals.

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  5. motiflocation motiflocation Public

    Small program to find motif locations in FASTA files.

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  6. Campbell_et_al Campbell_et_al Public

    Recombination maps from Campbell et al., Nat Comms, 2015

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