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Merge pull request #81 from deligianp/master
Refactor provision of on-demand batch computation project and update corresponding workflow file
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,83 +1,95 @@ | ||
| <?php | ||
|
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| use yii\helpers\Html; | ||
| use yii\widgets\LinkPager; | ||
| use app\components\Headers; | ||
| use app\models\Token; | ||
| use yii\helpers\Url; | ||
| use yii\helpers\Url; | ||
|
|
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| echo Html::CssFile('@web/css/project/tokens.css'); | ||
| $this->registerJsFile('@web/js/project/index.js', ['depends' => [\yii\web\JqueryAsset::className()]]); | ||
|
|
||
| $back_icon=''; | ||
| $access_icon='<i class="fas fa-external-link-square-alt"></i>'; | ||
| $update_icon='<i class="fas fa-pencil-alt"></i>'; | ||
| $back_link='/project/index'; | ||
| $delete_icon='<i class="fas fa-times"></i>'; | ||
| $new_icon='<i class="fas fa-plus-circle"></i>'; | ||
| $exclamation_icon='<i class="fas fa-exclamation-triangle" style="color:orange" title="The Vm belongs to an expired project"></i>'; | ||
| $back_icon = ''; | ||
| $access_icon = '<i class="fas fa-external-link-square-alt"></i>'; | ||
| $update_icon = '<i class="fas fa-pencil-alt"></i>'; | ||
| $back_link = '/project/index'; | ||
| $delete_icon = '<i class="fas fa-times"></i>'; | ||
| $new_icon = '<i class="fas fa-plus-circle"></i>'; | ||
| $exclamation_icon = '<i class="fas fa-exclamation-triangle" style="color:orange" title="The Vm belongs to an expired project"></i>'; | ||
| $mode = 0; | ||
| $edit_button_class=''; | ||
| $access_button_class =''; | ||
| $edit_button_class = ''; | ||
| $access_button_class = ''; | ||
| $ondemand_access_class = ''; | ||
|
|
||
|
|
||
| Headers::begin() ?> | ||
| <?php | ||
| echo Headers::widget( | ||
| ['title'=>'Project management '."</br>", | ||
| 'subtitle'=>$project->name, | ||
| 'buttons'=> | ||
| [ | ||
| ['fontawesome_class'=>$back_icon,'name'=> 'Back', 'action'=>[$back_link], 'type'=>'a', | ||
| 'options'=>['class'=>'btn btn-default', 'style'=>'width: 100px; color:grey ']] | ||
| ], | ||
| ]); | ||
| echo Headers::widget( | ||
| ['title' => 'Project management ' . "</br>", | ||
| 'subtitle' => $project->name, | ||
| 'buttons' => | ||
| [ | ||
| ['fontawesome_class' => $back_icon, 'name' => 'Back', 'action' => [$back_link], 'type' => 'a', | ||
| 'options' => ['class' => 'btn btn-default', 'style' => 'width: 100px; color:grey ']] | ||
| ], | ||
| ]); | ||
| ?> | ||
| <?Headers::end()?> | ||
| <? Headers::end() ?> | ||
| <br> | ||
| <h4><b> Approved resources</b></h4> | ||
| <div id="containerIntro"> | ||
| <h4><b>   Jobs: </b></h4><p><?=$initial_jobs?> (remaining: <?=$remaining_jobs?>)</p> <br> | ||
| <h4><b>   Cores: </b></h4><p><?=$details->cores?> (average use: <?=round($usage['cpu']/1000,2)?>)</p><br> | ||
| <h4><b>   Ram: </b></h4><p><?=$details->ram?>GB (average use: <?=round($usage['ram']/1000,2)?>GB)</p><br><br> | ||
| <h4><b>   Jobs: </b></h4> | ||
| <p><?= $initial_jobs ?> (remaining: <?= $remaining_jobs ?>)</p> <br> | ||
| <h4><b>   Cores: </b></h4> | ||
| <p><?= $details->cores ?> (average use: <?= round($usage['cpu'] / 1000, 2) ?>)</p><br> | ||
| <h4><b>   Ram: </b></h4> | ||
| <p><?= $details->ram ?>GB (average use: <?= round($usage['ram'] / 1000, 2) ?>GB)</p><br><br> | ||
|
|
||
| <p> *These computational resources are available for the execution of containerized software packages and workflows.</p> | ||
| <p> *These computational resources are available for the execution of containerized software packages and | ||
| workflows.</p> | ||
| </div> | ||
|
|
||
| <br> | ||
| <h4><b> Using the resources</b></h4> | ||
| <div id="containerIntro"> | ||
| <p>  There are two ways to use the approved computational resources of this project:</p> <br> | ||
| <p>        ‐ Use our Job execution User Interface (UI) to manually run computational analysis tasks leveraging Web-based wizards.</p> <br> | ||
| <p>        ‐ Use our Job execution API to programmatically run computational analysis tasks (API tokens need to be issued).</p> <br><br> | ||
|
|
||
| <p>  You can select the way that better fits your needs (but it's possible to consume your approved resources using both ways):</p><br> | ||
| <h4><b>Gaining access</b></h4> | ||
| <p> | ||
| In order to use the task execution infrastructure an API key is required. You can manage your API keys in the | ||
| page: | ||
| </p> | ||
| <div class="text-center"> | ||
| <?= Html::a("API keys management", ['/project/token-management', 'id' => $id], ['class' => "btn btn-success btn-md $edit_button_class"]) ?> | ||
| </div> | ||
|
|
||
| <br> | ||
| <div style="float: left; width: 49.5%;text-align:right"> | ||
| <?=Html::a("Job execution UI",$compute,['class'=>"btn btn-success btn-md $access_button_class $ondemand_access_class", 'style'=>'width:270px; height:60px; text-align: center; line-height: 45px; font-size:20px; ','target'=>'_blank'])?> | ||
| <br/> | ||
| <br/> | ||
| <?=Html::a("API tokens management",['/project/token-management', 'id'=>$id],['class'=>"btn btn-success btn-md $edit_button_class", 'style'=>'width:270px; height:60px; text-align: center; line-height: 45px; font-size:20px;'])?> | ||
| </div> | ||
|
|
||
| <div style="float: right; width: 49.5%;text-align:left"> | ||
| <?=Html::a("UI user guide",'index.php?r=site%2Fhelp',['class'=>"btn btn btn-secondary btn-md $access_button_class $ondemand_access_class", 'style'=>'width:270px; height:60px; text-align: center; line-height: 45px; font-size:20px;'])?> | ||
| <br/> | ||
| <br/> | ||
| <?=Html::a("API documentation",'https://schema.athenarc.gr/docs/schema-api/',['class'=>"btn btn btn-secondary btn-md $access_button_class $ondemand_access_class", 'style'=>'width:270px; height:60px; text-align: center; line-height: 45px; font-size:20px;','target'=>'_blank'])?> | ||
| <h4><b> Using the resources</b></h4> | ||
| <p>  There are two ways to schedule task executions:</p> <br> | ||
| <div class="p-4 row"> | ||
| <div class="col-6 border-right border-muted"> | ||
| <h5><b>SCHEMA api</b></h5> | ||
| <p> | ||
| Use our Job execution REST API to programmatically run computational analysis tasks | ||
| </p> | ||
| <div class="text-center"> | ||
| <?= Html::a("SCHEMA api Swagger", Yii::$app->params["schema_api_url"] ?? "#", ['class' => "btn btn-success btn-md $access_button_class $ondemand_access_class"]) ?> | ||
| </div> | ||
| </div> | ||
| <div class="col-6"> | ||
| <h5><b>HYPATIA lab</b></h5> | ||
| <p> | ||
| Use our Job execution User Interface (UI) to manually run | ||
| computational analysis tasks | ||
| </p> | ||
| <div class="text-center"> | ||
| <?= Html::a("HYPATIA lab", Yii::$app->params["hypatia_lab_url"] ?? "#", ['class' => "btn btn-md $access_button_class $ondemand_access_class text-white", 'style' => 'background-color: #e6833b', 'target' => '_blank']) ?> | ||
| </div> | ||
| </div> | ||
| </div> | ||
|
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||
| <br> | ||
| <br/> | ||
| <br> | ||
| <br/> | ||
| <p class="h4"><b> Monitoring job execution</b></p> | ||
| <div id="containerIntro"> | ||
| <p>  API calls can used to retrieve the status of the computational jobs related to this project (for details, see API documentation). | ||
| <br>  You can also examine the status of any job from the respective page of the Job execution UI:</p> <br> | ||
|
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| <h4><b>How to schedule on-demand batch computation tasks</b></h4> | ||
| <p> | ||
| Learn about the task execution infrastructure and how to run tasks on the provided documentation: | ||
| <div class="text-center"> | ||
| <?= Html::a("Documentation", Yii::$app->params["schema_api_docs_url"] ?? "#", ['class' => "btn btn-success btn-md $access_button_class $ondemand_access_class", 'target' => '_blank']) ?> | ||
| </div> | ||
| <br> | ||
| <center> | ||
| <?=Html::a("Job monitoring UI",'https://hypatia-comp.athenarc.gr/index.php?r=software%2Fhistory',['class'=>"btn btn-success btn-md $access_button_class $ondemand_access_class", 'style'=>'width:270px; height:60px; text-align: center; line-height: 45px; font-size:20px;','target'=>'_blank'])?> | ||
| </center> | ||
| </p> |
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