Bioinformatics_Lab_Materials

This repository contains materials describing implementations of key bioinformatics pipelines. This content is primarily classwork completed in the Advanced Bioinformatics Lab (CSE 185) at UCSD under the instruction of Professor Melissa Gymrek

Contents include:

1. Next Generation Sequencing and Variant Calling
2. Kmer Analysis, assembly and long reads
3. Population Genetics/ GWAS
4. Transcriptomics, Differential Expression Analysis
5. Epigenomics
6. scRNAseq