v1.5.1-rc2

What's Changed

• Patch fix to 1.5.1 release candidate by @matrulda in #17

Full Changelog: v1.5.1-rc1...v1.5.1-rc2

v1.5.1-rc1

What's Changed

• Update to seqreports version ed7490c482ffcf292ee7075f093af127e7f494d0 by @matrulda in #14
• Update seqreports to 9adcd5fcc767c780dd471d331c3a0c2ffa370e1c by @matrulda in #15
• Bump version to 1.5.1-rc1 and change author by @matrulda in #16

Full Changelog: v1.5.0...v1.5.1-rc1

v1.5.0

What's Changed

• Implement command generator for arbitrary pipelines by @Aratz in #7
• Update seqreports pipeline by @Aratz in #9
• Include service version in response by @Aratz in #10
• Update seqreports: Increase time for FastQC and FastQ Screen slurm jobs by @matrulda in #11
• Update pipeline config schema by @Aratz in #12

Full Changelog: v1.4.2...v1.5.0

Fix NovaSeq X Plus bug

This patch releases fixes a bug that was introduced when the new software release (v1.2.0) for the NovaSeq X Plus was released. Specifically, the RunParameters.xml stores the flowcell type of the run under another key. There is still support for machines that have not been updated.

v1.4.1

Minor changes

• Remove queue system and let Slurm handle the queuing.
• Make it possible to interpolate environment variables

v1.4.0

Major changes

• Update seqreports to support the new NovaSeq X +

Minor changes

• Update and pin requirements
• Rewrite setup.py

Full Changelog: v1.3.0...v1.3.1-rc2

v1.3.0

• seqreports submodule updated to https://github.com/Molmed/seqreports/releases/tag/v1.1.0
• fixed pylint error W1514