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Issue #382: Warning when PEAR contains a JCAS class that is used as a…
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… feature range outside the PEAR

- Make sure tests close files so temporary test folders can be deleted
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reckart committed Aug 26, 2024
1 parent 57aa798 commit 2be2168
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Showing 2 changed files with 56 additions and 22 deletions.
Original file line number Diff line number Diff line change
Expand Up @@ -54,6 +54,7 @@
import org.apache.uima.cas.CAS;
import org.apache.uima.cas.impl.CASImpl;
import org.apache.uima.internal.util.Class_TCCL;
import org.apache.uima.internal.util.Misc;
import org.apache.uima.internal.util.UIMAClassLoader;
import org.apache.uima.it.pear_with_typesystem.spi.JCasClassProviderForTesting;
import org.apache.uima.it.pear_with_typesystem.type.ComplexAnnotation;
Expand Down Expand Up @@ -107,8 +108,8 @@ void setup() throws Exception
}

/**
* PEAR use {@link ComplexAnnotation} directly - we assume it is in the PEAR's local
* classpath and available at compile time.
* PEAR use {@link ComplexAnnotation} directly - we assume it is in the PEAR's local classpath
* and available at compile time.
*/
@Test
void testScenario1(@TempDir File aTemp) throws Exception
Expand All @@ -131,6 +132,8 @@ void testScenario1(@TempDir File aTemp) throws Exception
.hasSize(1) //
.allSatisfy(complexAnnotation -> assertThat(complexAnnotation)
.isInstanceOf(ComplexAnnotation.class));

pearAnnotator.getUimaContextAdmin().getResourceManager().destroy();
}

/**
Expand Down Expand Up @@ -161,14 +164,16 @@ void testScenario2(@TempDir File aTemp) throws Exception
.hasSize(1) //
.allSatisfy(complexAnnotation -> assertThat(complexAnnotation)
.isInstanceOf(ComplexAnnotation.class));

pearAnnotator.getUimaContextAdmin().getResourceManager().destroy();
}

/**
* PEAR can use {@link ComplexAnnotation} directly - we assume it is in the PEAR's local
* classpath and available at compile time.
* <p>
* However, PEAR does not know about {@link ComplexAnnotationSubtype}. Yet, it will find
* that the CAS contains an annotation of that type.
* However, PEAR does not know about {@link ComplexAnnotationSubtype}. Yet, it will find that
* the CAS contains an annotation of that type.
*/
@Test
void testScenario3(@TempDir File aTemp) throws Exception
Expand All @@ -190,6 +195,8 @@ void testScenario3(@TempDir File aTemp) throws Exception
assertThatExceptionOfType(AnalysisEngineProcessException.class) //
.isThrownBy(() -> pearAnnotator.process(cas)) //
.withRootCauseInstanceOf(ClassCastException.class);

pearAnnotator.getUimaContextAdmin().getResourceManager().destroy();
}

private AnalysisEngine installPear(File aTemp,
Expand Down Expand Up @@ -245,15 +252,13 @@ public IsolatingResourceManager_impl(Map<String, Object> aResourceMap,
aParameterizedResourceInstanceMap);
}

@SuppressWarnings("resource")
@Override
public synchronized void setExtensionClassPath(String aClasspath, boolean aResolveResource)
throws MalformedURLException
{
var parentCL = Class_TCCL.get_parent_cl();
var uimaCL = new UIMAClassLoader(aClasspath, Class_TCCL.get_parent_cl());
uimaCL = clConfigurer.apply(parentCL,
new IsolatingUIMAClassloader("PEAR Classloader", uimaCL));
var uimaCL = clConfigurer.apply(parentCL, new IsolatingUIMAClassloader(
"PEAR Classloader", parentCL, Misc.classpath2urls(aClasspath)));
setExtensionClassLoader(uimaCL, aResolveResource);
}

Expand Down Expand Up @@ -333,6 +338,16 @@ public IsolatingUIMAClassloader(String aName, ClassLoader aParent, URL... aClass
id = aName;
}

@Override
public void close() throws IOException
{
if (getParent() instanceof UIMAClassLoader uimaClassLoader) {
uimaClassLoader.close();
}

super.close();
}

@SafeVarargs
public final <T> IsolatingUIMAClassloader delegatingSPI(ClassLoader aDelegate,
Class<T> aServiceInterface, Class<? extends T>... aServiceProviders)
Expand Down Expand Up @@ -513,26 +528,32 @@ protected Class<?> loadClass(String aName, boolean aResolve) throws ClassNotFoun
LOG.debug("[{}] redefining class: {}", id, aName);

String internalName = aName.replace(".", "/") + ".class";
InputStream is = getParent().getResourceAsStream(internalName);
if (is == null) {
URL url = getParent().getResource(internalName);
if (url == null) {
throw new ClassNotFoundException(aName);
}

try {
var buffer = new ByteArrayOutputStream();
is.transferTo(buffer);
byte[] bytes = buffer.toByteArray();
Class<?> cls = defineClass(aName, bytes, 0, bytes.length);
if (cls.getPackage() == null) {
int packageSeparator = aName.lastIndexOf('.');
if (packageSeparator != -1) {
String packageName = aName.substring(0, packageSeparator);
definePackage(packageName, null, null, null, null, null, null,
null);
// Disable JAR cache so JUnit can delete the temporary folder after the test
var urlConnection = url.openConnection();
urlConnection.setDefaultUseCaches(false);

try (InputStream is = urlConnection.getInputStream()) {
var buffer = new ByteArrayOutputStream();
is.transferTo(buffer);
byte[] bytes = buffer.toByteArray();
Class<?> cls = defineClass(aName, bytes, 0, bytes.length);
if (cls.getPackage() == null) {
int packageSeparator = aName.lastIndexOf('.');
if (packageSeparator != -1) {
String packageName = aName.substring(0, packageSeparator);
definePackage(packageName, null, null, null, null, null, null,
null);
}
}
loadedClasses.put(aName, cls);
return cls;
}
loadedClasses.put(aName, cls);
return cls;
}
catch (IOException ex) {
throw new ClassNotFoundException(
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13 changes: 13 additions & 0 deletions uimaj-parent/pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -449,6 +449,19 @@
</dependency>
</dependencies>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-javadoc-plugin</artifactId>
<configuration>
<tags combine.children="append">
<tag>
<name>forRemoval</name>
<placement>a</placement>
<head>To be removed in version:</head>
</tag>
</tags>
</configuration>
</plugin>
</plugins>
</pluginManagement>

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