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43 Open 124 Closed
43 Open 124 Closed
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Issues list

Statically link against musl
#167 opened Nov 30, 2021 by Boarders
1
Invalid implied alignments defect
#166 opened Jun 28, 2020 by recursion-ninja
1
Efficient Character Representations enhancement performance/optimization refactor
#164 opened Mar 25, 2020 by Boarders
@Boarders
5
Add Distance Wagner method enhancement performance/optimization
#163 opened Feb 27, 2020 by Boarders
5
Building the project on a fresh machine enhancement
#162 opened Feb 27, 2020 by Boarders
8
Experiment with GC options performance/optimization
#161 opened Jan 17, 2020 by Boarders
@Boarders
4
Dynamic character re-rooting error defect
#159 opened Nov 19, 2019 by Boarders
@recursion-ninja @Boarders
Assert that input chracters are in the alphabet when reading in a TCM file defect minor Likely to take less than 10 hours of work.
#155 opened Oct 25, 2019 by recursion-ninja
@recursion-ninja @Boarders
Add validation check to Read command
#152 opened Oct 18, 2019 by Boarders
In new graph representation add validation module
#151 opened Oct 18, 2019 by Boarders
Add integration tests for clustering low priority verification/testing
#145 opened Jul 2, 2019 by Boarders Version 1.0.0
@Boarders
Profile our integration tests low priority performance/optimization verification/testing
#144 opened Jun 27, 2019 by Boarders Version 1.0.0
@recursion-ninja @Boarders
Write a k-medians clustering algorithm enhancement low priority
#142 opened Jun 12, 2019 by Boarders Version 1.0.0
@recursion-ninja @Boarders
1
Add benchmarking suite for pcg-language parser performance/optimization
#140 opened Jun 11, 2019 by recursion-ninja
TNT xread correct the handling of "- interpretation flag" defect low priority
#136 opened May 18, 2019 by recursion-ninja
@recursion-ninja
Implement partitioned FASTA enhancement low priority
#135 opened May 18, 2019 by recursion-ninja
@recursion-ninja @Boarders
Standardize newick string serialization enhancement low priority minor Likely to take less than 10 hours of work.
#134 opened May 18, 2019 by recursion-ninja
@recursion-ninja @Boarders
Add a Cost type enhancement minor Likely to take less than 10 hours of work.
#133 opened Apr 25, 2019 by recursion-ninja
@recursion-ninja @Boarders
1
Add metadata information record low priority refactor
#131 opened Apr 8, 2019 by Boarders Version 1.0.0
@recursion-ninja
Add graph conversion enhancement low priority
#130 opened Apr 2, 2019 by Boarders Version 0.4.0
@recursion-ninja @Boarders
1
Add an "install accessories" script low priority
#127 opened Mar 1, 2019 by recursion-ninja Version 1.0.0
1
Make postorder and preorder functions perform a single memoized pass of the graph performance/optimization refactor
#117 opened Jan 15, 2019 by Boarders Version 0.4.0
@Boarders
Experiment with Haskell-side, hashable memoized function(s) low priority performance/optimization
#100 opened Nov 15, 2018 by recursion-ninja Version 1.0.0
@recursion-ninja @Boarders
8
Check to ensure that each taxa has at least one, non-missing character value low priority minor Likely to take less than 10 hours of work.
#93 opened Oct 23, 2018 by recursion-ninja
@recursion-ninja @Boarders
TNT parser doesn't correctly construct intervals from additive characters defect low priority
#89 opened Oct 18, 2018 by recursion-ninja Version 1.0.0
@recursion-ninja
ProTip! Exclude everything labeled bug with -label:bug.