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Added biocViews and package description in DESCRIPTION
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almeidasilvaf committed Nov 2, 2023
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19 changes: 16 additions & 3 deletions DESCRIPTION
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Package: HybridExpress
Title: Analysis of RNA-seq data for hybrid species and their parents
Title: Comparative analysis of RNA-seq data for hybrids and their progenitors
Version: 0.99.0
Date: 2023-10-17
Authors@R:
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comment = c(ORCID = "0000-0003-4327-3730")
)
)
Description: What the package does (one paragraph).
Description: HybridExpress can be used to perform comparative transcriptomics
analysis of hybrids (or allopolyploids) relative to their
progenitor species. The package features functions to perform exploratory
analyses of sample grouping, identify differentially expressed genes
in hybrids relative to their progenitors, classify genes in expression
categories (N = 12) and classes (N = 5),
and perform functional analyses. We also provide users with graphical
functions for the seamless creation of publication-ready figures that are
commonly used in the literature.
License: GPL-3
URL: https://github.com/almeidasilvaf/HybridExpress
BugReports: https://support.bioconductor.org/tag/HybridExpress
biocViews:
Software,
FunctionalGenomics
FunctionalGenomics,
GeneExpression,
Transcriptomics,
RNASeq,
Classification,
DifferentialExpression
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
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