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Simplified pkgdown configs
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almeidasilvaf committed Jan 12, 2024
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1 change: 0 additions & 1 deletion README.Rmd
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Expand Up @@ -84,7 +84,6 @@ Please note that the `HybridExpress` project is released with a [Contributor Cod
* Continuous code testing is possible thanks to [GitHub actions](https://www.tidyverse.org/blog/2020/04/usethis-1-6-0/) through `r BiocStyle::CRANpkg('usethis')`, `r BiocStyle::CRANpkg('remotes')`, and `r BiocStyle::CRANpkg('rcmdcheck')` customized to use [Bioconductor's docker containers](https://www.bioconductor.org/help/docker/) and `r BiocStyle::Biocpkg('BiocCheck')`.
* Code coverage assessment is possible thanks to [codecov](https://codecov.io/gh) and `r BiocStyle::CRANpkg('covr')`.
* The [documentation website](http://almeidasilvaf.github.io/HybridExpress) is automatically updated thanks to `r BiocStyle::CRANpkg('pkgdown')`.
* The code is styled automatically thanks to `r BiocStyle::CRANpkg('styler')`.
* The documentation is formatted thanks to `r BiocStyle::CRANpkg('devtools')` and `r BiocStyle::CRANpkg('roxygen2')`.

This package was developed using `r BiocStyle::Biocpkg('biocthis')`.
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6 changes: 2 additions & 4 deletions README.md
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Expand Up @@ -105,19 +105,17 @@ contributing to this project, you agree to abide by its terms.
*[rcmdcheck](https://CRAN.R-project.org/package=rcmdcheck)* customized
to use [Bioconductor’s docker
containers](https://www.bioconductor.org/help/docker/) and
*[BiocCheck](https://bioconductor.org/packages/3.17/BiocCheck)*.
*[BiocCheck](https://bioconductor.org/packages/3.18/BiocCheck)*.
- Code coverage assessment is possible thanks to
[codecov](https://codecov.io/gh) and
*[covr](https://CRAN.R-project.org/package=covr)*.
- The [documentation
website](http://almeidasilvaf.github.io/HybridExpress) is
automatically updated thanks to
*[pkgdown](https://CRAN.R-project.org/package=pkgdown)*.
- The code is styled automatically thanks to
*[styler](https://CRAN.R-project.org/package=styler)*.
- The documentation is formatted thanks to
*[devtools](https://CRAN.R-project.org/package=devtools)* and
*[roxygen2](https://CRAN.R-project.org/package=roxygen2)*.

This package was developed using
*[biocthis](https://bioconductor.org/packages/3.17/biocthis)*.
*[biocthis](https://bioconductor.org/packages/3.18/biocthis)*.
11 changes: 3 additions & 8 deletions inst/_pkgdown.yml
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Expand Up @@ -8,14 +8,9 @@ template:
code_font:
google: "Source Code Pro"
primary: "#18416a" # navbar hover and sidebar: dark blue
navbar-light-bg: "#0092ac" # navbar bg: Bioc blue
navbar-bg: "#0092ac" # navbar bg: Bioc blue
navbar-light-brand-color: "#f9fafb" # pkg name: white
text-muted: "#e9ecef" # version: light gray
navbar-light-color: "#f8f9fa" # navbar pages text color: white
navbar-light-hover-color: "#87b13f" # navbar text on hover: Bioc green
navbar-light-brand-color: "#18416a" # pkg name: white
navbar-light-hover-color: "#18416a" # navbar text on hover: Bioc green
pkgdown-nav-height: 78px

navbar:
bg: "#0092ac"
type: light
type: light
4 changes: 0 additions & 4 deletions pkgdown/extra.css

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