Merge pull request #146 from alliance-genome/PR-validation-deps-updat…

…e-mgmt Prevent main-build-and-deploy from running multiple instances in parallel + deps-lock-update improvements
alliance-genome · Jul 11, 2024 · 39875d2 · 39875d2
2 parents 52bbc73 + 228a4b8
commit 39875d2
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diff --git a/.github/workflows/PR-validation.yml b/.github/workflows/PR-validation.yml
@@ -972,6 +972,8 @@ jobs:
   stage-deps-lock-updates:
     if: ${{ !contains(github.event.pull_request.labels.*.name, 'no-deps-lock-updates') }}
     runs-on: ubuntu-22.04
+    permissions:
+      pull-requests: write
     # Always stage updated lock files, even on failure,
     #  to highlight dependency changes which could be the cause of the failure.
     needs:
@@ -1090,8 +1092,8 @@ jobs:
       - name: Generate and store no-change message
         if: ${{ !steps.diff-files.outputs.content }}
         run: |
-          {
-            echo 'Automatic dependency lock file updates enabled, but no updates found. No dependency updates will be made when merging this PR.'
+          echo 'Automatic dependency lock file updates enabled, but no updates found. No (additional) dependency updates will be made when merging this PR.' \
+           > git-diff-message.md
       - name: Post PR comment with change message
         env:
           GH_TOKEN: ${{ github.token }}
@@ -1100,9 +1102,11 @@ jobs:
   report-no-deps-lock-updates-label:
     if: ${{ contains(github.event.pull_request.labels.*.name, 'no-deps-lock-updates') }}
     runs-on: ubuntu-22.04
+    permissions:
+      pull-requests: write
     steps:
       - name: Post PR comment with notification no updates will be made
         env:
           GH_TOKEN: ${{ github.token }}
         run: |
-          gh pr comment ${{ github.event.pull_request._links.html.href }} --body '`no-deps-lock-updates` label detected, so automatic dependency lock file updates are disabled. No dependency updates will be made when merging this PR.'
+          gh pr comment ${{ github.event.pull_request._links.html.href }} --body '`no-deps-lock-updates` label detected, so automatic dependency lock file updates are disabled. No (additional) dependency updates will be made when merging this PR.'
diff --git a/.github/workflows/main-build-and-deploy.yml b/.github/workflows/main-build-and-deploy.yml
@@ -4,6 +4,9 @@ on:
     types: [closed]
     branches:
       - main
+concurrency:
+  group: ${{ github.workflow }}
+  cancel-in-progress: false
 jobs:
   on-merge:
     name: Skip on unmerged

diff --git a/api/tests/requirements.txt b/api/tests/requirements.txt
@@ -37,59 +37,59 @@ click==8.1.7 \
     # via
     #   typer
     #   uvicorn
-coverage[toml]==7.5.4 \
-    --hash=sha256:018a12985185038a5b2bcafab04ab833a9a0f2c59995b3cec07e10074c78635f \
-    --hash=sha256:02ff6e898197cc1e9fa375581382b72498eb2e6d5fc0b53f03e496cfee3fac6d \
-    --hash=sha256:042183de01f8b6d531e10c197f7f0315a61e8d805ab29c5f7b51a01d62782747 \
-    --hash=sha256:1014fbf665fef86cdfd6cb5b7371496ce35e4d2a00cda501cf9f5b9e6fced69f \
-    --hash=sha256:1137f46adb28e3813dec8c01fefadcb8c614f33576f672962e323b5128d9a68d \
-    --hash=sha256:16852febd96acd953b0d55fc842ce2dac1710f26729b31c80b940b9afcd9896f \
-    --hash=sha256:2174e7c23e0a454ffe12267a10732c273243b4f2d50d07544a91198f05c48f47 \
-    --hash=sha256:2214ee920787d85db1b6a0bd9da5f8503ccc8fcd5814d90796c2f2493a2f4d2e \
-    --hash=sha256:3257fdd8e574805f27bb5342b77bc65578e98cbc004a92232106344053f319ba \
-    --hash=sha256:3684bc2ff328f935981847082ba4fdc950d58906a40eafa93510d1b54c08a66c \
-    --hash=sha256:3a6612c99081d8d6134005b1354191e103ec9705d7ba2754e848211ac8cacc6b \
-    --hash=sha256:3d7564cc09dd91b5a6001754a5b3c6ecc4aba6323baf33a12bd751036c998be4 \
-    --hash=sha256:44da56a2589b684813f86d07597fdf8a9c6ce77f58976727329272f5a01f99f7 \
-    --hash=sha256:5013ed890dc917cef2c9f765c4c6a8ae9df983cd60dbb635df8ed9f4ebc9f555 \
-    --hash=sha256:54317c2b806354cbb2dc7ac27e2b93f97096912cc16b18289c5d4e44fc663233 \
-    --hash=sha256:56b4eafa21c6c175b3ede004ca12c653a88b6f922494b023aeb1e836df953ace \
-    --hash=sha256:581ea96f92bf71a5ec0974001f900db495488434a6928a2ca7f01eee20c23805 \
-    --hash=sha256:5cd64adedf3be66f8ccee418473c2916492d53cbafbfcff851cbec5a8454b136 \
-    --hash=sha256:5df54843b88901fdc2f598ac06737f03d71168fd1175728054c8f5a2739ac3e4 \
-    --hash=sha256:65e528e2e921ba8fd67d9055e6b9f9e34b21ebd6768ae1c1723f4ea6ace1234d \
-    --hash=sha256:6aae5cce399a0f065da65c7bb1e8abd5c7a3043da9dceb429ebe1b289bc07806 \
-    --hash=sha256:6cfb5a4f556bb51aba274588200a46e4dd6b505fb1a5f8c5ae408222eb416f99 \
-    --hash=sha256:7076b4b3a5f6d2b5d7f1185fde25b1e54eb66e647a1dfef0e2c2bfaf9b4c88c8 \
-    --hash=sha256:73ca8fbc5bc622e54627314c1a6f1dfdd8db69788f3443e752c215f29fa87a0b \
-    --hash=sha256:79b356f3dd5b26f3ad23b35c75dbdaf1f9e2450b6bcefc6d0825ea0aa3f86ca5 \
-    --hash=sha256:7a892be37ca35eb5019ec85402c3371b0f7cda5ab5056023a7f13da0961e60da \
-    --hash=sha256:8192794d120167e2a64721d88dbd688584675e86e15d0569599257566dec9bf0 \
-    --hash=sha256:820bc841faa502e727a48311948e0461132a9c8baa42f6b2b84a29ced24cc078 \
-    --hash=sha256:8f894208794b164e6bd4bba61fc98bf6b06be4d390cf2daacfa6eca0a6d2bb4f \
-    --hash=sha256:a04e990a2a41740b02d6182b498ee9796cf60eefe40cf859b016650147908029 \
-    --hash=sha256:a44963520b069e12789d0faea4e9fdb1e410cdc4aab89d94f7f55cbb7fef0353 \
-    --hash=sha256:a6bb74ed465d5fb204b2ec41d79bcd28afccf817de721e8a807d5141c3426638 \
-    --hash=sha256:ab73b35e8d109bffbda9a3e91c64e29fe26e03e49addf5b43d85fc426dde11f9 \
-    --hash=sha256:aea072a941b033813f5e4814541fc265a5c12ed9720daef11ca516aeacd3bd7f \
-    --hash=sha256:b1ccf5e728ccf83acd313c89f07c22d70d6c375a9c6f339233dcf792094bcbf7 \
-    --hash=sha256:b385d49609f8e9efc885790a5a0e89f2e3ae042cdf12958b6034cc442de428d3 \
-    --hash=sha256:b3d45ff86efb129c599a3b287ae2e44c1e281ae0f9a9bad0edc202179bcc3a2e \
-    --hash=sha256:b4a474f799456e0eb46d78ab07303286a84a3140e9700b9e154cfebc8f527016 \
-    --hash=sha256:b95c3a8cb0463ba9f77383d0fa8c9194cf91f64445a63fc26fb2327e1e1eb088 \
-    --hash=sha256:c5986ee7ea0795a4095ac4d113cbb3448601efca7f158ec7f7087a6c705304e4 \
-    --hash=sha256:cdd31315fc20868c194130de9ee6bfd99755cc9565edff98ecc12585b90be882 \
-    --hash=sha256:cef4649ec906ea7ea5e9e796e68b987f83fa9a718514fe147f538cfeda76d7a7 \
-    --hash=sha256:d05c16cf4b4c2fc880cb12ba4c9b526e9e5d5bb1d81313d4d732a5b9fe2b9d53 \
-    --hash=sha256:d2e344d6adc8ef81c5a233d3a57b3c7d5181f40e79e05e1c143da143ccb6377d \
-    --hash=sha256:d45d3cbd94159c468b9b8c5a556e3f6b81a8d1af2a92b77320e887c3e7a5d080 \
-    --hash=sha256:db14f552ac38f10758ad14dd7b983dbab424e731588d300c7db25b6f89e335b5 \
-    --hash=sha256:dbc5958cb471e5a5af41b0ddaea96a37e74ed289535e8deca404811f6cb0bc3d \
-    --hash=sha256:ddbd2f9713a79e8e7242d7c51f1929611e991d855f414ca9996c20e44a895f7c \
-    --hash=sha256:e16f3d6b491c48c5ae726308e6ab1e18ee830b4cdd6913f2d7f77354b33f91c8 \
-    --hash=sha256:e2afe743289273209c992075a5a4913e8d007d569a406ffed0bd080ea02b0633 \
-    --hash=sha256:e564c2cf45d2f44a9da56f4e3a26b2236504a496eb4cb0ca7221cd4cc7a9aca9 \
-    --hash=sha256:ed550e7442f278af76d9d65af48069f1fb84c9f745ae249c1a183c1e9d1b025c
+coverage[toml]==7.6.0 \
+    --hash=sha256:0086cd4fc71b7d485ac93ca4239c8f75732c2ae3ba83f6be1c9be59d9e2c6382 \
+    --hash=sha256:01c322ef2bbe15057bc4bf132b525b7e3f7206f071799eb8aa6ad1940bcf5fb1 \
+    --hash=sha256:03cafe82c1b32b770a29fd6de923625ccac3185a54a5e66606da26d105f37dac \
+    --hash=sha256:044a0985a4f25b335882b0966625270a8d9db3d3409ddc49a4eb00b0ef5e8cee \
+    --hash=sha256:07ed352205574aad067482e53dd606926afebcb5590653121063fbf4e2175166 \
+    --hash=sha256:0d1b923fc4a40c5832be4f35a5dab0e5ff89cddf83bb4174499e02ea089daf57 \
+    --hash=sha256:0e7b27d04131c46e6894f23a4ae186a6a2207209a05df5b6ad4caee6d54a222c \
+    --hash=sha256:1fad32ee9b27350687035cb5fdf9145bc9cf0a094a9577d43e909948ebcfa27b \
+    --hash=sha256:289cc803fa1dc901f84701ac10c9ee873619320f2f9aff38794db4a4a0268d51 \
+    --hash=sha256:3c59105f8d58ce500f348c5b56163a4113a440dad6daa2294b5052a10db866da \
+    --hash=sha256:46c3d091059ad0b9c59d1034de74a7f36dcfa7f6d3bde782c49deb42438f2450 \
+    --hash=sha256:482855914928c8175735a2a59c8dc5806cf7d8f032e4820d52e845d1f731dca2 \
+    --hash=sha256:49c76cdfa13015c4560702574bad67f0e15ca5a2872c6a125f6327ead2b731dd \
+    --hash=sha256:4b03741e70fb811d1a9a1d75355cf391f274ed85847f4b78e35459899f57af4d \
+    --hash=sha256:4bea27c4269234e06f621f3fac3925f56ff34bc14521484b8f66a580aacc2e7d \
+    --hash=sha256:4d5fae0a22dc86259dee66f2cc6c1d3e490c4a1214d7daa2a93d07491c5c04b6 \
+    --hash=sha256:543ef9179bc55edfd895154a51792b01c017c87af0ebaae092720152e19e42ca \
+    --hash=sha256:54dece71673b3187c86226c3ca793c5f891f9fc3d8aa183f2e3653da18566169 \
+    --hash=sha256:6379688fb4cfa921ae349c76eb1a9ab26b65f32b03d46bb0eed841fd4cb6afb1 \
+    --hash=sha256:65fa405b837060db569a61ec368b74688f429b32fa47a8929a7a2f9b47183713 \
+    --hash=sha256:6616d1c9bf1e3faea78711ee42a8b972367d82ceae233ec0ac61cc7fec09fa6b \
+    --hash=sha256:6fe885135c8a479d3e37a7aae61cbd3a0fb2deccb4dda3c25f92a49189f766d6 \
+    --hash=sha256:7221f9ac9dad9492cecab6f676b3eaf9185141539d5c9689d13fd6b0d7de840c \
+    --hash=sha256:76d5f82213aa78098b9b964ea89de4617e70e0d43e97900c2778a50856dac605 \
+    --hash=sha256:7792f0ab20df8071d669d929c75c97fecfa6bcab82c10ee4adb91c7a54055463 \
+    --hash=sha256:831b476d79408ab6ccfadaaf199906c833f02fdb32c9ab907b1d4aa0713cfa3b \
+    --hash=sha256:9146579352d7b5f6412735d0f203bbd8d00113a680b66565e205bc605ef81bc6 \
+    --hash=sha256:9cc44bf0315268e253bf563f3560e6c004efe38f76db03a1558274a6e04bf5d5 \
+    --hash=sha256:a73d18625f6a8a1cbb11eadc1d03929f9510f4131879288e3f7922097a429f63 \
+    --hash=sha256:a8659fd33ee9e6ca03950cfdcdf271d645cf681609153f218826dd9805ab585c \
+    --hash=sha256:a94925102c89247530ae1dab7dc02c690942566f22e189cbd53579b0693c0783 \
+    --hash=sha256:ad4567d6c334c46046d1c4c20024de2a1c3abc626817ae21ae3da600f5779b44 \
+    --hash=sha256:b2e16f4cd2bc4d88ba30ca2d3bbf2f21f00f382cf4e1ce3b1ddc96c634bc48ca \
+    --hash=sha256:bbdf9a72403110a3bdae77948b8011f644571311c2fb35ee15f0f10a8fc082e8 \
+    --hash=sha256:beb08e8508e53a568811016e59f3234d29c2583f6b6e28572f0954a6b4f7e03d \
+    --hash=sha256:c4cbe651f3904e28f3a55d6f371203049034b4ddbce65a54527a3f189ca3b390 \
+    --hash=sha256:c7b525ab52ce18c57ae232ba6f7010297a87ced82a2383b1afd238849c1ff933 \
+    --hash=sha256:ca5d79cfdae420a1d52bf177de4bc2289c321d6c961ae321503b2ca59c17ae67 \
+    --hash=sha256:cdab02a0a941af190df8782aafc591ef3ad08824f97850b015c8c6a8b3877b0b \
+    --hash=sha256:d17c6a415d68cfe1091d3296ba5749d3d8696e42c37fca5d4860c5bf7b729f03 \
+    --hash=sha256:d39bd10f0ae453554798b125d2f39884290c480f56e8a02ba7a6ed552005243b \
+    --hash=sha256:d4b3cd1ca7cd73d229487fa5caca9e4bc1f0bca96526b922d61053ea751fe791 \
+    --hash=sha256:d50a252b23b9b4dfeefc1f663c568a221092cbaded20a05a11665d0dbec9b8fb \
+    --hash=sha256:da8549d17489cd52f85a9829d0e1d91059359b3c54a26f28bec2c5d369524807 \
+    --hash=sha256:dcd070b5b585b50e6617e8972f3fbbee786afca71b1936ac06257f7e178f00f6 \
+    --hash=sha256:ddaaa91bfc4477d2871442bbf30a125e8fe6b05da8a0015507bfbf4718228ab2 \
+    --hash=sha256:df423f351b162a702c053d5dddc0fc0ef9a9e27ea3f449781ace5f906b664428 \
+    --hash=sha256:dff044f661f59dace805eedb4a7404c573b6ff0cdba4a524141bc63d7be5c7fd \
+    --hash=sha256:e7e128f85c0b419907d1f38e616c4f1e9f1d1b37a7949f44df9a73d5da5cd53c \
+    --hash=sha256:ed8d1d1821ba5fc88d4a4f45387b65de52382fa3ef1f0115a4f7a20cdfab0e94 \
+    --hash=sha256:f2501d60d7497fd55e391f423f965bbe9e650e9ffc3c627d5f0ac516026000b8 \
+    --hash=sha256:f7db0b6ae1f96ae41afe626095149ecd1b212b424626175a6633c2999eaad45b
     # via pytest-cov
 dnspython==2.6.1 \
     --hash=sha256:5ef3b9680161f6fa89daf8ad451b5f1a33b18ae8a1c6778cdf4b43f08c0a6e50 \