Update pytest requirement from ==8.0.* to ==8.1.* in /pipeline/seq_retrieval #23
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: PR validation | |
| on: | |
| pull_request: | |
| types: [synchronize, opened, reopened, edited] | |
| branches: | |
| - main | |
| jobs: | |
| pipeline-seq-retrieval-container-image-build: | |
| name: pipeline/seq_retrieval container-image build | |
| runs-on: ubuntu-22.04 | |
| defaults: | |
| run: | |
| shell: bash | |
| working-directory: ./pipeline/seq_retrieval/ | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| sparse-checkout: | | |
| pipeline/seq_retrieval/ | |
| - name: Build container image | |
| run: | | |
| make container-image | |
| pipeline-seq-retrieval-python-typing-check: | |
| name: pipeline/seq_retrieval python typing check | |
| runs-on: ubuntu-22.04 | |
| defaults: | |
| run: | |
| shell: bash | |
| working-directory: ./pipeline/seq_retrieval/ | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| sparse-checkout: | | |
| pipeline/seq_retrieval/ | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Check python typing | |
| run: | | |
| make check-python-typing | |
| pipeline-seq-retrieval-python-style-check: | |
| name: pipeline/seq_retrieval python style check | |
| runs-on: ubuntu-22.04 | |
| defaults: | |
| run: | |
| shell: bash | |
| working-directory: ./pipeline/seq_retrieval/ | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| sparse-checkout: | | |
| pipeline/seq_retrieval/ | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Check python style | |
| run: | | |
| make check-python-style | |
| pipeline-seq-retrieval-unit-tests: | |
| name: pipeline/seq_retrieval unit tests | |
| runs-on: ubuntu-22.04 | |
| defaults: | |
| run: | |
| shell: bash | |
| working-directory: ./pipeline/seq_retrieval/ | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| sparse-checkout: | | |
| pipeline/seq_retrieval/ | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Run unit tests | |
| run: | | |
| make run-unit-tests | |
| #TODO: add integration testing |