Add copying of the GenBank file

alexhbnr · Mar 11, 2022 · 7bd8f4f · 7bd8f4f
1 parent d4db87b
commit 7bd8f4f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/wrappers/prokka/wrapper.py b/workflow/wrappers/prokka/wrapper.py
@@ -27,7 +27,7 @@
     "  {fafilename})"
 )
 
-for suffix in ['faa', 'ffn', 'fna', 'gff', 'tsv', 'txt']:
+for suffix in ['faa', 'ffn', 'fna', 'gbk', 'gff', 'tsv', 'txt']:
     shutil.copy(f"{snakemake.params.tmpdir}/{snakemake.wildcards.bin}.{suffix}",
                 f"{snakemake.params.outdir}/{snakemake.wildcards.bin}.{suffix}")
 shutil.rmtree(snakemake.params.tmpdir)