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@aicjanelia

Advanced Imaging Center

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  1. LLSM LLSM Public

    Lattice Light-Sheet Microscope Pipeline

    Python 8 2

  2. SiMView SiMView Public

    Code for processing SiMView data collected at the AIC

    MATLAB 2

  3. hmm-bayes hmm-bayes Public

    HMM-Bayes is a single particle tracking software intended to identify switching between diffusive and directed motion states

    MATLAB 1

  4. one-offs one-offs Public

    A collection of one-off scripts (a.k.a our junk drawer)

    Python 1 1

  5. 4d-frap-calculator 4d-frap-calculator Public

    Calculate Fluorescence Recovery After Photobleaching (FRAP) curves using 4d (x,y,z,t) microscope images.

    MATLAB 1

  6. RatioImage RatioImage Public

    MATLAB

Repositories

Showing 10 of 16 repositories
  • LLSM Public

    Lattice Light-Sheet Microscope Pipeline

    aicjanelia/LLSM’s past year of commit activity
    Python 8 BSD-3-Clause 2 7 0 Updated Dec 16, 2024
  • visitor-kerney Public

    Analysis scripts developed for the Kerney project

    aicjanelia/visitor-kerney’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 6, 2024
  • SiMView Public

    Code for processing SiMView data collected at the AIC

    aicjanelia/SiMView’s past year of commit activity
    MATLAB 2 0 1 0 Updated Oct 16, 2023
  • visitor-patapoutian Public

    iPALM | "Visualizing mechanically activated PIEZO channels"

    aicjanelia/visitor-patapoutian’s past year of commit activity
    MATLAB 0 MIT 0 0 0 Updated Jun 8, 2023
  • iPALM-beadRemoval Public

    Automatic removal of beads from iPALM localization data

    aicjanelia/iPALM-beadRemoval’s past year of commit activity
    MATLAB 0 MIT 0 0 0 Updated Mar 15, 2023
  • smlm_datafusion3d_iPALM Public Forked from imphys/smlm_datafusion3d

    Software for 3D particle averaging of SMLM data adapted for iPALM data

    aicjanelia/smlm_datafusion3d_iPALM’s past year of commit activity
    MATLAB 0 Apache-2.0 3 0 0 Updated Aug 29, 2022
  • hmm-bayes Public

    HMM-Bayes is a single particle tracking software intended to identify switching between diffusive and directed motion states

    aicjanelia/hmm-bayes’s past year of commit activity
    MATLAB 1 0 1 0 Updated May 27, 2022
  • iPALM_mask Public

    iPALM | "Distinct actin filament populations in focal adhesions"

    aicjanelia/iPALM_mask’s past year of commit activity
    MATLAB 0 0 0 0 Updated Mar 17, 2022
  • MFM Public

    Matlab Code for processing and analysis of aberration corrected multifocal microscopy data

    aicjanelia/MFM’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jan 24, 2022
  • ipalmplotter Public
    aicjanelia/ipalmplotter’s past year of commit activity
    MATLAB 0 0 0 0 Updated Nov 24, 2021
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