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updated labels in atka
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@jimianelli
jimianelli committed Feb 28, 2024
1 parent 7c1b7f2 commit 348f387
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Empty file added examples/atka/F_profile.out
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153 changes: 153 additions & 0 deletions examples/atka/Input_Log.rep
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Original file line number Diff line number Diff line change
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run_name
std
Tier
3
nalts
7
alt_list
1 2 3 4 5 6 7
TAC_ABC
1
SrType
2
Rec_Gen
1
Fmsy_F35
0
Rec_Cond
0
Write_Big
1
npro
15
nsims
1000
styr
2022
bzero_in
2.14289e-314
phizero_in
1.97626e-323
alpha_in
0
sigmar_in
2.14609e-314
rho_in
3.91012e-314
nyrs_catch_in
3
nspp
1
OY_min
0
OY_max
2e+06
spp_file_name
amak.prj



















ABC_Multiplier
1
N_scalar
1
Alt4_SPR
0.75
ntacspp
1
tac_ind
1
Obs_Catch
2022 66481
2023 83800
2024 73495
maxabc
2.60197
theta
0.417
0.372
0.361
0.296
0.2733
0.125
-0.300856
SSL_spp(i)
1
Const_Buffer(i)
0
ngear(i)
1
nsexes(i)
1
avg_5yrF(i)
0.466309
FABC_Adj(i)
1
SPR_abc(i)
0.4
SPR_ofl(i)
0.35
spawnmo(i)
8
nages(i)
11
Fratiotmp(i)
1 0 0 0 0
M_Ftmp(i)
0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
pmaturetmp_F(i)
0.005 0.037 0.224 0.688 0.944 0.992 0.999 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
pmaturetmp_M(i)
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
wt_Ftmp(i)
53 170.51 438.746 532.373 702.888 741.487 835.179 913.014 933.513 899.299 961.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
wt_gear_Ftmp(i)
69 409.472 565.989 654.075 742.345 791.25 804.113 845.83 828.65 850.669 872.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
wt_gear_Mtmp(i)
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
sel_Ftmp(i)
0.00127026 0.0124189 0.0999134 0.292556 0.493402 0.661302 0.852503 1 0.923677 0.575225 0.575225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
sel_Mtmp(i)
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
n0_Ftmp(i)
455.117 327.78 225.928 180.065 204.794 57.5847 48.566 11.1321 19.4992 16.1917 16.6349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
n0_Mtmp(i)
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
nrec
43
Rtmp
2029.18 510.378 302.256 329.928 212.274 287.859 311.806 496.744 428.929 584.25 467.616 1174.85 563.228 330.767 513.567 854.815 340.554 334.724 862.518 199.665 307.073 717.886 1625.57 1059.21 1187.72 256.331 342.385 460.791 320.225 850.262 727.305 225.784 489.818 351.231 540.93 1000.95 702.742 197.174 468.108 340.657 775.326 458.576 413.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SSBtmp
185063 194924 225633 281301 308840 278432 242762 204377 171283 153353 151813 157796 169000 189832 214867 217034 189390 167558 148283 131538 121405 125866 121836 113387 146360 209974 260828 270171 243816 203159 174091 152785 150435 155099 145082 139850 146641 154981 175310 180589 157355 136916 132864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
99 changes: 99 additions & 0 deletions examples/atka/alt_proj.out
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Stock Alt Year Catch ABC OFL SSB TotBiom
Model_16.0b 1 2023 83799.9 98588.3 118787 122541 615027
Model_16.0b 1 2024 73495 86464.1 101188 111122 606662
Model_16.0b 1 2025 80839 80839 95229.6 105236 623219
Model_16.0b 1 2026 77777.1 77777.1 92491.4 106221 635879
Model_16.0b 1 2027 80536.7 80536.7 96193 110493 655119
Model_16.0b 1 2028 84714.7 84714.7 101278 113880 668308
Model_16.0b 1 2029 87345.6 87345.6 104498 116270 673907
Model_16.0b 1 2030 88654.4 88654.4 106073 117263 676706
Model_16.0b 1 2031 89114.6 89114.6 106625 117281 677145
Model_16.0b 1 2032 89109 89109 106561 117310 675478
Model_16.0b 1 2033 88865.1 88865.1 106268 117279 674184
Model_16.0b 1 2034 88605 88605 105985 116943 674838
Model_16.0b 1 2035 88577 88577 105913 116752 677120
Model_16.0b 1 2036 88884.6 88884.6 106282 117090 676236
Model_16.0b 2 2023 83799.9 98588.3 118787 122541 615027
Model_16.0b 2 2024 73495 86464.1 101188 111122 606662
Model_16.0b 2 2025 80839 80839 95229.6 105236 623219
Model_16.0b 2 2026 77777.1 77777.1 92491.4 106221 635879
Model_16.0b 2 2027 80536.7 80536.7 96193 110493 655119
Model_16.0b 2 2028 84714.7 84714.7 101278 113880 668308
Model_16.0b 2 2029 87345.6 87345.6 104498 116270 673907
Model_16.0b 2 2030 88654.4 88654.4 106073 117263 676706
Model_16.0b 2 2031 89114.6 89114.6 106625 117281 677145
Model_16.0b 2 2032 89109 89109 106561 117310 675478
Model_16.0b 2 2033 88865.1 88865.1 106268 117279 674184
Model_16.0b 2 2034 88605 88605 105985 116943 674838
Model_16.0b 2 2035 88577 88577 105913 116752 677120
Model_16.0b 2 2036 88884.6 88884.6 106282 117090 676236
Model_16.0b 3 2023 83799.9 98588.3 118787 122541 615027
Model_16.0b 3 2024 73495 86464.1 101188 111122 606662
Model_16.0b 3 2025 68344.2 80839 95229.6 108351 623219
Model_16.0b 3 2026 69221 81957.7 97490.8 112436 647097
Model_16.0b 3 2027 72154.2 86261.3 103139 118834 671754
Model_16.0b 3 2028 75774.3 91776.5 109884 123992 688996
Model_16.0b 3 2029 78666.5 95717.8 114677 127796 698241
Model_16.0b 3 2030 80417 97920.9 117310 129771 703659
Model_16.0b 3 2031 81152.4 98951 118578 130390 705684
Model_16.0b 3 2032 81426.3 99362.6 119018 130740 704965
Model_16.0b 3 2033 81470.7 99350.2 118970 130856 704157
Model_16.0b 3 2034 81307.9 99083.2 118660 130545 704901
Model_16.0b 3 2035 81190.1 99035.9 118598 130365 707148
Model_16.0b 3 2036 81341.3 99369.1 119028 130744 706319
Model_16.0b 4 2023 83799.9 98588.3 118787 122541 615027
Model_16.0b 4 2024 73495 86464.1 101188 111122 606662
Model_16.0b 4 2025 21003.3 80839 95229.6 119949 623219
Model_16.0b 4 2026 24298 97897.5 116802 139833 689852
Model_16.0b 4 2027 27524.6 111949 134360 159044 746148
Model_16.0b 4 2028 30646.8 124703 149899 174592 787778
Model_16.0b 4 2029 33192.6 134763 161954 186748 816146
Model_16.0b 4 2030 35022.6 141870 170413 195257 836518
Model_16.0b 4 2031 36130.5 146239 175606 200665 849655
Model_16.0b 4 2032 36748.2 148726 178615 204382 856897
Model_16.0b 4 2033 37137.3 150326 180559 206960 861836
Model_16.0b 4 2034 37319.3 151088 181474 208278 866485
Model_16.0b 4 2035 37419.1 151568 182082 209150 871299
Model_16.0b 4 2036 37561.6 152165 182813 210260 872217
Model_16.0b 5 2023 83799.9 98588.3 118787 122541 615027
Model_16.0b 5 2024 73495 86464.1 101188 111122 606662
Model_16.0b 5 2025 0 80839 95229.6 124921 623219
Model_16.0b 5 2026 0 104526 125007 153195 708936
Model_16.0b 5 2027 0 123691 148718 180788 783248
Model_16.0b 5 2028 0 141573 170203 204444 841782
Model_16.0b 5 2029 0 156585 188071 224184 885856
Model_16.0b 5 2030 0 168069 201697 239499 920489
Model_16.0b 5 2031 0 175938 211053 250678 945953
Model_16.0b 5 2032 0 181035 217164 259050 963406
Model_16.0b 5 2033 0 184686 221539 265413 976626
Model_16.0b 5 2034 0 187020 224357 269642 987739
Model_16.0b 5 2035 0 188624 226301 272719 997501
Model_16.0b 5 2036 0 190154 228155 275526 1.00221e+06
Model_16.0b 6 2023 118787 98588.3 118787 113113 615027
Model_16.0b 6 2024 84865.8 72133.3 84865.8 96078.5 575519
Model_16.0b 6 2025 77259.5 65318.2 77259.5 92625 588393
Model_16.0b 6 2026 80811 67848 80811 96169.1 611874
Model_16.0b 6 2027 86630.1 72482.4 86630.1 100795 633722
Model_16.0b 6 2028 91491 76593.8 91491 103763 646104
Model_16.0b 6 2029 94377.6 78896.4 94377.6 105593 650398
Model_16.0b 6 2030 95342.3 79743.3 95342.3 106143 651894
Model_16.0b 6 2031 95520 79912.7 95520 105940 651629
Model_16.0b 6 2032 95262.8 79713.7 95262.8 105926 649683
Model_16.0b 6 2033 94991.2 79475.9 94991.2 105885 648387
Model_16.0b 6 2034 94715 79259.4 94715 105560 649083
Model_16.0b 6 2035 94591.9 79185.2 94591.9 105417 651418
Model_16.0b 6 2036 94977.3 79490.3 94977.3 105799 650657
Model_16.0b 7 2023 98588.2 98588.3 118787 118600 615027
Model_16.0b 7 2024 80272.1 80272.2 94147.3 104213 593470
Model_16.0b 7 2025 86618.4 73429.5 86618.4 97372.2 606706
Model_16.0b 7 2026 83930.7 70518 83930.7 97839.8 617801
Model_16.0b 7 2027 87523.1 73246.3 87523.1 101308 635406
Model_16.0b 7 2028 91697.9 76767.8 91697.9 103909 646523
Model_16.0b 7 2029 94395.6 78909.2 94395.6 105638 650488
Model_16.0b 7 2030 95338 79737.9 95338 106163 651928
Model_16.0b 7 2031 95521.2 79912.8 95521.2 105952 651652
Model_16.0b 7 2032 95265.6 79715.6 95265.6 105932 649696
Model_16.0b 7 2033 94992.9 79477.1 94992.9 105887 648393
Model_16.0b 7 2034 94715.8 79260 94715.8 105562 649086
Model_16.0b 7 2035 94592.2 79185.5 94592.2 105418 651419
Model_16.0b 7 2036 94977.4 79490.4 94977.4 105799 650658
42 changes: 42 additions & 0 deletions examples/atka/amak.prj
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#runname
Model_16.0b
#ssl_spp
1
#Dorn_buffer
0
#nfsh
1
#nsex
1
#avgF5yr
0.466309
#F40_mult
1
#spr_abc
0.4
#spr_msy
0.35
#sp_mo
8
#nages
11
#Frat
1
#M
0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3
#pmat
0.005 0.037 0.224 0.688 0.944 0.992 0.999 1 1 1 1
#wtage_sp
53 170.51 438.746 532.373 702.888 741.487 835.179 913.014 933.513 899.299 961.619
#wtage_fsh
69 409.472 565.989 654.075 742.345 791.25 804.113 845.83 828.65 850.669 872.894
#sel
0.00127026 0.0124189 0.0999134 0.292556 0.493402 0.661302 0.852503 1 0.923677 0.575225 0.575225
#N
455.117 327.78 225.928 180.065 204.794 57.5847 48.566 11.1321 19.4992 16.1917 16.6349
#nyrs
43
#R
2029.18 510.378 302.256 329.928 212.274 287.859 311.806 496.744 428.929 584.25 467.616 1174.85 563.228 330.767 513.567 854.815 340.554 334.724 862.518 199.665 307.073 717.886 1625.57 1059.21 1187.72 256.331 342.385 460.791 320.225 850.262 727.305 225.784 489.818 351.231 540.93 1000.95 702.742 197.174 468.108 340.657 775.326 458.576 413.419
#SSB
185063 194924 225633 281301 308840 278432 242762 204377 171283 153353 151813 157796 169000 189832 214867 217034 189390 167558 148283 131538 121405 125866 121836 113387 146360 209974 260828 270171 243816 203159 174091 152785 150435 155099 145082 139850 146641 154981 175310 180589 157355 136916 132864
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