Oracle is throwing a logging-related exception if curator comment is written in upper case

[seasidesparrow]

Several uncaught exceptions were generated when "DELETE" was used instead of "delete" in the curator comment field. At oracle_util L360, the code checks to see if the curator comment is one of 'update', 'add', 'delete', but this is not case-insensitive. If the curator uses 'DELETE', the if-then condition is met, and the code logs a warning and then drops the row from the result set. Logging appears to be successful, but subsequent to logging the code is throwing an exception:

Message: 'Error: Bad curator comment at'
Arguments: ('2023arXiv230706859A',)
--- Logging error ---
Traceback (most recent call last):
  File "/usr/lib/python3.8/logging/__init__.py", line 1081, in emit
    msg = self.format(record)
  File "/usr/lib/python3.8/logging/__init__.py", line 925, in format
    return fmt.format(record)
  File "/usr/local/lib/python3.8/dist-packages/adsputils/__init__.py", line 598, in format
    msg = jsonlogger.JsonFormatter.format(self, record)
  File "/usr/local/lib/python3.8/dist-packages/pythonjsonlogger/jsonlogger.py", line 128, in format
    record.message = record.getMessage()
  File "/usr/lib/python3.8/logging/__init__.py", line 369, in getMessage
    msg = msg % self.args
TypeError: not all arguments converted during string formatting
Call stack:
  File "run.py", line 198, in <module>
    main()
  File "run.py", line 157, in main
    status = oracle_util.update_db_curated_matches(filename)
  File "/app/adsdocmatch/oracle_util.py", line 501, in update_db_curated_matches
    matches = self.read_google_sheet(input_filename)
  File "/app/adsdocmatch/oracle_util.py", line 361, in read_google_sheet
    logger.warning('Error: Bad curator comment at', row.source_bib)

[seasidesparrow]

Two changes are needed here, one to allow flexibility in curator tagging, and one to fix the logging message:

            comments = ['update', 'add', 'delete']
            row.curator_comment = row.curator_comment.lower()
            if row.curator_comment not in comments:
                logger.warning('Error: Bad curator comment at %s' % row.source_bib)
                dt.drop(index, inplace=True)

[seasidesparrow]

Resolved by #23