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feat: starting to build insertion API
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dbirman committed Sep 21, 2024
1 parent eb69b10 commit 3ceab3c
Showing 1 changed file with 26 additions and 0 deletions.
26 changes: 26 additions & 0 deletions src/pinpoint_api/insertions.py
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from vbl_aquarium.models.unity import Vector3
from vbl_aquarium.models.pinpoint import InsertionModel

# Coordinates are in (ap, ml, dv)
# Coordinates are in mm

BREGMA_DICT = {
'allen_mouse_25um': Vector3(
x = 5.2,
y = 5.7,
z = 0.33
)
}

class Insertion():

def __init__(self, atlas: str = 'allen_mouse_25um', transform: str = 'null',
entry_coordinate: Vector3 = None, depth: float = None,
tip_coordinate: Vector3 = None,
angles: Vector3 = None,
reference_coordinate: Vector3 = BREGMA_DICT['allen_mouse_25um']):
"""Create an insertion
"""
pass

def

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