Summary : Using any clinical trial id, from across the globe, find the associated diseases/interventions, research articles and genes. Also discover relationships b/w various medical topics through co-occurrences in articles. Query the graph using SparQL from cli or GraphQL using any API client tool ex: Postman or curl
Feature list :
- Using GraphQL API knowledge graph can be queried using any API client tool ex: curl or Postman.
- Graph includes trials from across the globe. Data is sourced from WHO's ICTRP and clinicaltrials.gov
- Links from trial to MeSH vocabulary are added for conditions and interventions employed in the trial.
- Links from trial to PubMed articles are added. PubMed's experts curate this metadata information for each article.
- Added MRCOC to the graph for the selected articles linked to clinical trials.
- Added PheGenI links i.e. links from phenotype to genotype as links between MeSH DUI and GeneID.
- Added SparQL query execution feature. Adding CLI mode. Adding a count SparQL query for demo.
- 5 co-existing bi-partite graphs b/w trial--> condition, trial--> intervention, trial --> articles, article --> MeSH DUIs, gene id --> MeSH DUIs together comprise this knowledge graph.
Changes in this release : Enabled GraphQL server mode of execution.
Artifacts:
- For graph and trial ids list refer to v0.8 release as there are no changes to them.