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Documenter.jl committed Nov 28, 2024
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2 changes: 1 addition & 1 deletion dev/.documenter-siteinfo.json
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{"documenter":{"julia_version":"1.11.1","generation_timestamp":"2024-11-28T17:18:12","documenter_version":"1.8.0"}}
{"documenter":{"julia_version":"1.11.1","generation_timestamp":"2024-11-28T18:23:17","documenter_version":"1.8.0"}}
62 changes: 31 additions & 31 deletions dev/API/index.html
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2 changes: 1 addition & 1 deletion dev/index.html
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# And making a little animation out of it:
CairoMakie.record(f, "plant_animation.mp4", 1:120) do frame
ax2.azimuth[] = 0.3π + 0.3 * sin(2π * frame / 120)
end</code></pre></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="plot_diagram/makie_diagram/">Makie.jl »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 17:18">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
end</code></pre></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="plot_diagram/makie_diagram/">Makie.jl »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 18:23">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
14 changes: 7 additions & 7 deletions dev/makie_3d/index.html
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Page(exportable=true, offline=true)</code></pre><p>Then we can plot our interactive 3D plant:</p><pre><code class="language-julia hljs">using PlantGeom, WGLMakie
mtg = read_opf(joinpath(dirname(dirname(pathof(PlantGeom))),&quot;test&quot;,&quot;files&quot;,&quot;simple_plant.opf&quot;))
viz(mtg)</code></pre><div>
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width="50mm" height="25mm" viewBox="0 0 2 1" stroke="none"
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record(f, &quot;coffee_steps.mp4&quot;, 1:12, framerate=2) do timestep
p.index[] = timestep
end</code></pre><pre class="documenter-example-output"><code class="nohighlight hljs ansi">&quot;coffee_steps.mp4&quot;</code></pre><p><video src="../coffee_steps.mp4" controls="true" title><a href="../coffee_steps.mp4"></a></video></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../plot_diagram/plots_diagram/">« Plots.jl</a><a class="docs-footer-nextpage" href="../API/">API »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 17:18">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
end</code></pre><pre class="documenter-example-output"><code class="nohighlight hljs ansi">&quot;coffee_steps.mp4&quot;</code></pre><p><video src="../coffee_steps.mp4" controls="true" title><a href="../coffee_steps.mp4"></a></video></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../plot_diagram/plots_diagram/">« Plots.jl</a><a class="docs-footer-nextpage" href="../API/">API »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 18:23">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion dev/plot_diagram/makie_diagram/index.html
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PlantGeom.coordinates!(opf, force = true)
# Then we plot the MTG using the newly created ZZ attribute:
diagram(opf, color = :YY)</code></pre><img src="529ab4fa.svg" alt="Example block output"/><p>We can also color the edges differently, <em>e.g.</em> using the XX attribute computed using <code>coordinates!</code>:</p><pre><code class="language-julia hljs">PlantGeom.coordinates!(opf, force = true)
diagram(opf, color = :YY, edge_color = :XX)</code></pre><img src="f827fba6.svg" alt="Example block output"/><p>Attributes used for coloring may have <code>missing</code> values. In this case you can choose their color using <code>color_missing</code>, <em>e.g.</em>:</p><pre><code class="language-julia hljs">diagram(opf, color = :Length, edge_color = :Width, color_missing = :red)</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../">« Home</a><a class="docs-footer-nextpage" href="../plots_diagram/">Plots.jl »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 17:18">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
diagram(opf, color = :YY, edge_color = :XX)</code></pre><img src="f827fba6.svg" alt="Example block output"/><p>Attributes used for coloring may have <code>missing</code> values. In this case you can choose their color using <code>color_missing</code>, <em>e.g.</em>:</p><pre><code class="language-julia hljs">diagram(opf, color = :Length, edge_color = :Width, color_missing = :red)</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../">« Home</a><a class="docs-footer-nextpage" href="../plots_diagram/">Plots.jl »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 18:23">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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4 changes: 2 additions & 2 deletions dev/plot_diagram/mtgplot3d.html
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<script src="https://cdn.plot.ly/plotly-2.6.3.min.js"></script> <div id="952590ec-8bfa-485b-91cc-870b9469e29b" style="width:600px;height:400px;"></div>
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2 changes: 1 addition & 1 deletion dev/plot_diagram/plots_diagram/index.html
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# import Pkg; Pkg.add(&quot;PlotlyJS&quot;)
plotlyjs()
opf = read_opf(joinpath(dirname(dirname(pathof(PlantGeom))),&quot;test&quot;,&quot;files&quot;,&quot;simple_plant.opf&quot;))
plot(opf, node_color = :Length)</code></pre><object type="text/html" data="mtgplot.html" style="width:100%;height:500px;"></object><p>The default plot is a 2D projection of the MTG, but you can also get a 3D projection using the <code>mode</code> keyword argument:</p><pre><code class="language-julia hljs">plot(opf, node_color = :Length, mode = &quot;3d&quot;)</code></pre><object type="text/html" data="mtgplot3d.html" style="width:100%;height:500px;"></object></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../makie_diagram/">« Makie.jl</a><a class="docs-footer-nextpage" href="../../makie_3d/">3D Makie recipes »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 17:18">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
plot(opf, node_color = :Length)</code></pre><object type="text/html" data="mtgplot.html" style="width:100%;height:500px;"></object><p>The default plot is a 2D projection of the MTG, but you can also get a 3D projection using the <code>mode</code> keyword argument:</p><pre><code class="language-julia hljs">plot(opf, node_color = :Length, mode = &quot;3d&quot;)</code></pre><object type="text/html" data="mtgplot3d.html" style="width:100%;height:500px;"></object></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../makie_diagram/">« Makie.jl</a><a class="docs-footer-nextpage" href="../../makie_3d/">3D Makie recipes »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Thursday 28 November 2024 18:23">Thursday 28 November 2024</span>. Using Julia version 1.11.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

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