miseq_report that works, but tests are not that great

[necrolyte2]

No description provided.

[averagehat]

INFO:miseqreport:Getting stats for C0576-94_S71_L001_R1_001.fastq.gz
Traceback (most recent call last):
  File "/media/VD_Research/People/ngssync/miseqreport.py", line 199, in <module>
    reportpth = run.run_stats(threads=threads)
  File "/media/VD_Research/People/ngssync/miseqreport.py", line 69, in run_stats
    allstats = self.all_sample_read_stats(threads=threads)
  File "/media/VD_Research/People/ngssync/miseqreport.py", line 61, in all_sample_read_stats
    return sorted(pool.map(stat, self.get_fqs_per_samplename()))
  File "/media/VD_Research/Admin/PBS/Software/Python-2.7.9/lib/python2.7/multiprocessing/pool.py", line 251, in map
    return self.map_async(func, iterable, chunksize).get()
  File "/media/VD_Research/Admin/PBS/Software/Python-2.7.9/lib/python2.7/multiprocessing/pool.py", line 558, in get
    raise self._value
ZeroDivisionError: float division by zero

[necrolyte2]

Fixing local then will push changes