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Add config across scripts and overall pipeline script #167

Add config across scripts and overall pipeline script

Add config across scripts and overall pipeline script #167

Workflow file for this run

name: CI
on:
workflow_dispatch:
pull_request:
push:
branches:
- main
jobs:
pre-commit:
name: Format + lint code
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: actions/setup-python@v5
with:
python-version: "3.x"
- uses: pre-commit/[email protected]
with:
extra_args: --hook-stage manual --all-files
checks:
name: Run tests for Python ${{ matrix.python-version }} on ${{ matrix.runs-on }}
runs-on: ${{ matrix.runs-on }}
needs: [pre-commit]
strategy:
fail-fast: false
matrix:
python-version: ['3.10', '3.11', '3.12'] # test oldest and latest supported versions
runs-on: [ubuntu-latest] # can be extended to other OSes, e.g. [ubuntu-latest, macos-latest]
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
allow-prereleases: true
- name: Setup Miniconda
uses: conda-incubator/[email protected]
with:
auto-update-conda: true
python-version: ${{ matrix.python-version }}
channels: conda-forge
channel-priority: strict
auto-activate-base: false
miniforge-version: latest
use-mamba: true
- name: Create conda environment
shell: bash -el {0}
run: |
conda create --name gdal_env python=${{ matrix.python-version }} -y
- name: Install GDAL
shell: bash -el {0}
run: |
conda activate gdal_env
mamba install conda-forge::gdal
- name: Install package
shell: bash -el {0}
run: |
conda activate gdal_env
python -m pip install .[test]
- name: Test package
shell: bash -el {0}
run: |
conda activate gdal_env
python -m pytest -ra --cov --cov-report=xml --cov-report=term --durations=20
- name: Upload coverage report
uses: codecov/[email protected]