v.0.1.0

UU-cellbiology · Nov 10, 2023 · 02a9017 · 02a9017
1 parent 19a9e3d
commit 02a9017
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Showing 2 changed files with 12 additions and 21 deletions.
diff --git a/src/main/java/btbvv/btcards/BoundedRangeEditorBT.java b/src/main/java/btbvv/btcards/BoundedRangeEditorBT.java
@@ -120,8 +120,6 @@ private BoundedRangeEditorBT(
             @Override
             public void actionPerformed(ActionEvent e) 
             {	
-//            	final boolean bSelected = cbSync.isSelected();
-//            	bSync = bSelected;
             	bSync = cbSync.isSelected();
 
             }

diff --git a/src/test/java/bvv/vistools/examples/BT_Example01.java b/src/test/java/bvv/vistools/examples/BT_Example01.java
@@ -25,34 +25,33 @@ public class BT_Example01 {
 	 */
 	public static void main( final String[] args )
 	{
-		//regular tif
-		/*
+		//regular tif init
+		/**/
 		final ImagePlus imp = IJ.openImage( "https://imagej.nih.gov/ij/images/t1-head.zip" );
 		//final ImagePlus imp = IJ.openImage( "/home/eugene/Desktop/head/t1-head.tif" );
 		final Img< UnsignedShortType > img = ImageJFunctions.wrapShort( imp );
 		final BvvSource source = BvvFunctions.show( img, "t1-head" );
 
-//		double [] minI = img.minAsDoubleArray();
-//		double [] maxI = img.maxAsDoubleArray();
-		*/
-		//BDV XML test
+		double [] minI = img.minAsDoubleArray();
+		double [] maxI = img.maxAsDoubleArray();
 		/**/
+
+
+		//BDV XML init
+		/*
 		final String xmlFilename = "/home/eugene/Desktop/head/export.xml";
 		SpimDataMinimal spimData = null;
 		try {
 			spimData = new XmlIoSpimDataMinimal().load( xmlFilename );
 		} catch (SpimDataException e) {
 			// TODO Auto-generated catch block
 			e.printStackTrace();
-		}//		//BDV XML
-//		double [] minI = spimData.getSequenceDescription().getImgLoader().getSetupImgLoader(0).getImage(0).minAsDoubleArray();
-//		double [] maxI = spimData.getSequenceDescription().getImgLoader().getSetupImgLoader(0).getImage(0).maxAsDoubleArray();
+		}		
 		final List< BvvStackSource< ? > > sources = BvvFunctions.show( spimData );
 		final BvvSource source = sources.get(0);
-		//BDV XML
 		double [] minI = spimData.getSequenceDescription().getImgLoader().getSetupImgLoader(0).getImage(0).minAsDoubleArray();
 		double [] maxI = spimData.getSequenceDescription().getImgLoader().getSetupImgLoader(0).getImage(0).maxAsDoubleArray();
-		/**/
+		*/
 
 		source.setDisplayRange(0, 655);
 		source.setDisplayGamma(0.5);
@@ -76,14 +75,8 @@ public static void main( final String[] args )
 		source.setLUT(getRGBLutTable("Fire"));
 
 		//crop half of the volume along Z axis in the shaders
-		//cropInterval is defined inside the "raw", non-transformed data interval
-
-
-
-
-
-		minI[2]=0.5*maxI[2];
-
+		//cropInterval is defined inside the "raw", non-transformed data interval		
+		minI[2]=0.5*maxI[2];		
 		source.setCropInterval(new FinalRealInterval(minI,maxI));