Merge pull request #487 from marinakraeva/patch-6

Update r-studio.md
USDA-SCINet · Jan 22, 2024 · 29b39b9 · 29b39b9
2 parents 86d78e6 + b906c5f
commit 29b39b9
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/sn_collections/_guides/r-studio.md b/sn_collections/_guides/r-studio.md
@@ -53,7 +53,7 @@ Users can either run RStudio Server in Open OnDemand or by manually submiting a
 A few Ceres-specific notes:
 1. **RStudio terminal** (bash command shell): since RStudio Server is running in a container with a Debian base image, you won’t be able to access software environment modules (e.g., that you would normally see when logging into Ceres and issuing the  `module list`  command), as those are installed on the (CentOS) host.
 2. **Data access:** your home directory is mounted inside the RStudio Server container, and the VRSC has configured Singularity to mount the /project directory.  $TMPDIR (which on a compute node is per-job local scratch on the compute node’s direct attached storage that gets deleted at the end of SLURM job) is mounted inside the container at /tmp.
-3. **Software installation:** The provided SLURM job script creates a ~/.Renviron file in your home directory that allows RStudio to install additional R packages into your home directory (the container image is immutable). Installing a lot of R libraries may contribute to the default 5G soft limit quota on your home directory being surpassed. To overcome this issue you can move R directory from your home directory to your project directory and create a symbolic link to the new location. In RStudio click on "Terminal" and enter the following commands substituting your values:
+3. **Software installation:** The provided SLURM job script creates a ~/.Renviron file in your home directory that allows RStudio to install additional R packages into your home directory (the container image is immutable). Installing a lot of R libraries may contribute to the default 15G soft limit quota on your home directory being surpassed. To overcome this issue you can move R directory from your home directory to your project directory and create a symbolic link to the new location. In RStudio click on "Terminal" and enter the following commands substituting your values:
 
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