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@Topp-Roots-Lab

Topp-Roots-Lab

A collection of projects designed to analyze phenotypic plant data by the Topp lab at the Donald Danforth Plant Science Center.

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  1. rsa-gui rsa-gui Public

    User-controlled pipeline for analyzing plant root system architecture

    Java 3 4

  2. Grapevine-inflorescence-architecture Grapevine-inflorescence-architecture Public archive

    MATLAB 3 1

  3. 3d-root-crown-analysis-pipeline 3d-root-crown-analysis-pipeline Public

    A pipeline to process 3-D volumes (.raw) of maize root crowns. Also known as XRCAP.

    Python 3 1

  4. rsa-tools rsa-tools Public archive

    External tools used by the GUI for analyzing plant root system architecture

    C++ 1

  5. Gia3D Gia3D Public

    Root3D Skeleton Traits by Olga Symonova. Also known as "skel" or "Skeleton".

    C++ 1

  6. 3D-Sorghum-Inflorescence 3D-Sorghum-Inflorescence Public archive

    C++ 1 1

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