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MapOfBindingCalc.m
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MapOfBindingCalc.m
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
% Subroutine MapOfBindingCalc calculates the map ofbinding
% for a given c0(g), g=1,2,3
% ...........dStatda to be added later..............
%
% Stat - statsum
% max - after Trace of the current statsum value reaches max, StatSum
% is being normilized by max
% NormCount - number of normalizations
% noLeftOverhang=.true. prohibits ligand overhang from the left DNA end
% noRightOverhang=.true. prohibits ligand overhang from the right DNA end
%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
function[cMap,tetaMap] = MapOfBindingCalc()
global Lpolymer fNumberOfLigands eNumberOfChromatinStates
global fid7
cMap=zeros([fNumberOfLigands+1 Lpolymer]);
tetaMap=zeros([eNumberOfChromatinStates Lpolymer]);
TIME=tic;
for TestSiteNumber=1:Lpolymer
fprintf('(site,g,e)={%d,%s,%s}\n',TestSiteNumber,'all','all');
[c,teta]=PointOfMapOfBindingCalc(TestSiteNumber);
cMap(2:end,TestSiteNumber)=c(2:end);
tetaMap(:,TestSiteNumber)=teta(:);
end % TestSiteNumber
end