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@TIO-IKIM

TIO-IKIM

Research Group of Translational Image-guided Oncology (TIO), Institute for Artificial Intelligence in Medicine (IKIM), Essen

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  1. CellViT CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    Python 249 43

  2. CLUE CLUE Public

    CLUE: A Clinical Language Understanding Evaluation for LLMs

    Python 15 2

  3. valuing-vicinity valuing-vicinity Public

    Valuing Vicinity: Memory attention framework for context-based semantic segmentation in histopathology

    Python 9

  4. k-Strip k-Strip Public

    k-strip: A novel segmentation algorithm in k-space for the application of skull stripping

    Python 6 1

  5. Tumor-likelihood-estimation-on-MRI-prostate-data-by-utilizing-k-Space-information Tumor-likelihood-estimation-on-MRI-prostate-data-by-utilizing-k-Space-information Public

    Preprocessing and prediction pipeline for the classification of magnetic resonance imaging (MRI) that takes advantage of the information rich complex valued k-Space.

    Python 5

  6. MOMO_Submission_Code MOMO_Submission_Code Public

    Submission Code for "Deep Learning-driven classification of external DICOM studies for PACS archivation"

    Jupyter Notebook 3 2

Repositories

Showing 10 of 14 repositories
  • medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    TIO-IKIM/medical_image_deidentification’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Dec 9, 2024
  • k-Strip Public

    k-strip: A novel segmentation algorithm in k-space for the application of skull stripping

    TIO-IKIM/k-Strip’s past year of commit activity
    Python 6 1 0 0 Updated Nov 11, 2024
  • TwixMRIAnonymizer Public

    Lightweight anonymization tool for Siemens twix MRI dataformat (.dat)

    TIO-IKIM/TwixMRIAnonymizer’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Nov 5, 2024
  • PathoPatcher Public

    PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, and configurable parameters

    TIO-IKIM/PathoPatcher’s past year of commit activity
    Python 2 1 1 0 Updated Nov 5, 2024
  • CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    TIO-IKIM/CellViT’s past year of commit activity
    Python 249 43 13 0 Updated Sep 30, 2024
  • ML_in_Medicine_Interactive_Seminar Public

    Course materials of WS 2022/2023 Uni-DuE Seminar "ML in Medicine - Theory & Practice"

    TIO-IKIM/ML_in_Medicine_Interactive_Seminar’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 11, 2024
  • Tumor-likelihood-estimation-on-MRI-prostate-data-by-utilizing-k-Space-information Public

    Preprocessing and prediction pipeline for the classification of magnetic resonance imaging (MRI) that takes advantage of the information rich complex valued k-Space.

    TIO-IKIM/Tumor-likelihood-estimation-on-MRI-prostate-data-by-utilizing-k-Space-information’s past year of commit activity
    Python 5 0 0 0 Updated Jul 17, 2024
  • TIO-IKIM/Transfer-learning-across-domain-boundaries’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jul 3, 2024
  • CLUE Public

    CLUE: A Clinical Language Understanding Evaluation for LLMs

    TIO-IKIM/CLUE’s past year of commit activity
    Python 15 MIT 2 0 0 Updated Jun 26, 2024
  • TIO-IKIM/MLiM22-website’s past year of commit activity
    TeX 0 0 1 0 Updated May 23, 2024

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