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Tools and examples for exporting our data in Neurodata Without Borders format

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Export Neurodata-without-borders files

archiveMTUtah_moveBlank

This script is the most important one, although it is 95% a blatant copy of the extracellular ephys tutorial on the NWB repository. It actually does the work with the NWB data structures.

Metadata Libraries

paperList

This script defines a structure (papers) that we can include in multiple export scripts so that I never have to look up DOIs for papers more than once. This is usefule because "related publications" is part of the metadata in an NWB file.

Helper Functions

getElectrodeTableFromMapFile

Give it a path to a Utah array map file (and a few other things), and it generates the electrodes "table" for that array.

getSpikeTimesFromTrainStruct

This processes the LZ-spikesort special <filename>_MATSORT.mat files and makes the spike information NWB-compliant.

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Tools and examples for exporting our data in Neurodata Without Borders format

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